RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 GUCY2FP51841 1108 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 RAD23BP54727 409 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 ADKP55263 362 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 GSCP56915 257 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 PCDH1Q08174 1060 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 BST2Q10589 180 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 GPR17Q13304 367 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 PLD1Q13393 1074 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SMC1AQ14683 1233 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SHHQ15465 462 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CNGA2Q16280 664 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 PSMD5Q16401 504 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 PTPROQ16827 1216 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 LRIT3Q3SXY7 679 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CTXN3Q4LDR2 81 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 HP1BP3Q5SSJ5 553 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 FAM171A1Q5VUB5 890 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 WSCD1Q658N2 575 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 LCLAT1Q6UWP7 414 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 VSTM1Q6UX27 236 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CD300LGQ6UXG3 332 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 ZNF662Q6ZS27 426 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 IRF2BP2Q7Z5L9 587 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CCNJLQ8IV13 435 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 GALNT12Q8IXK2 581 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SCML4Q8N228 414 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 C12orf50Q8NA57 414 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SLC4A11Q8NBS3 891 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 MYCBPAPQ8TBZ2 947 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 IPO4Q8TEX9 1081 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 HDAC7Q8WUI4 952 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CPLX3Q8WVH0 158 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SMARCD1Q96GM5 515 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 EIF3CQ99613 913 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CDCA3Q99618 268 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 HNRNPABQ99729 332 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 ARID3AQ99856 593 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 AGPAT1Q99943 283 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 YIPF2Q9BWQ6 316 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 NRSN2Q9GZP1 204 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 ZCWPW1Q9H0M4 648 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CXCL16Q9H2A7 254 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 CLEC4MQ9H2X3 399 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 HAUS4Q9H6D7 363 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 NHEJ1Q9H9Q4 299 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 LIN7BQ9HAP6 207 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SLC28A3Q9HAS3 691 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 RXFP1Q9HBX9 757 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 TLR9Q9NR96 1032 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 COMMD8Q9NX08 183 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 WDR35Q9P2L0 1181 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 NOCTQ9UK39 431 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 OAS3Q9Y6K5 1087 aaKnown RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 SCINQ9Y6U3 715 aa6.06□□□□□ -1.44
CDKN3-206ENST00000541304 FNDC1Q4ZHG4 1894 aaPredicted RBP6.06□□□□□ -1.44
CDKN3-206ENST00000541304 A0A096LPE4 126 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 A0A1W2PPZ6 126 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 BTNL10A8MVZ5 291 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 H3BNC9 293 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 O00370 1275 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 XPO1O14980 1071 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 PAX4O43316 350 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 NDUFB5O43674 189 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 TBC1D4O60343 1298 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 FBXO21O94952 628 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 NDUFA10O95299 355 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 TUBB4AP04350 444 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 CYP1A1P04798 512 aaPredicted RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 CALB1P05937 261 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 CA3P07451 260 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 POU2F2P09086 479 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 LINC00271P0C7V0 271 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 FAM200BP0CF97 657 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 SRGAP2BP0DMP2 458 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 SKILP12757 684 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 PTPN1P18031 435 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 TNFAIP3P21580 790 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 TKTP29401 623 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 BRCC3P46736 316 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 TUFMP49411 452 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 GATMP50440 423 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 KIF11P52732 1056 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 RPL10AP62906 217 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 TAP1Q03518 808 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 EXOSC6Q5RKV6 272 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 C9orf50Q5SZB4 431 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 LIN9Q5TKA1 542 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 FAM171BQ6P995 826 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 GJB7Q6PEY0 223 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 WDR59Q6PJI9 974 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 CCDC149Q6ZUS6 474 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 SPATA2LQ8IUW3 424 aaPredicted RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 VPS52Q8N1B4 723 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 ANKRD52Q8NB46 1076 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 C1orf131Q8NDD1 294 aaKnown RBP6.05□□□□□ -1.44
CDKN3-206ENST00000541304 ZNF606Q8WXB4 792 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 KAT5Q92993 513 aa6.05□□□□□ -1.44
CDKN3-206ENST00000541304 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms