RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RAB6CQ9H0N0 254 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 IL21Q9HBE4 155 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 CLEC1BQ9P126 229 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 DNMT3BQ9UBC3 853 aaKnown RBP9.78□□□□□ -0.84
DDX55-208ENST00000541259 CDH22Q9UJ99 828 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 NAALADL1Q9UQQ1 740 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 ASB3Q9Y575 518 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 SCINQ9Y6U3 715 aa9.78□□□□□ -0.84
DDX55-208ENST00000541259 A0A0A6YYK5 440 aaPredicted RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 C2CD4BA6NLJ0 364 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 TMEM110-MUSTN1A8MSY1 372 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 KRT86O43790 486 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 HSF2BPO75031 334 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 MTA2O94776 668 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 TBX18O95935 607 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 HNRNPA1P09651 372 aaKnown RBP eCLIP9.77□□□□□ -0.85
DDX55-208ENST00000541259 MYL4P12829 197 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 PDGFRAP16234 1089 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 GJA1P17302 382 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 PTPN2P17706 415 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 GABRR2P28476 465 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 HOXA9P31269 272 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 LTBRP36941 435 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 SCNN1AP37088 669 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 CCR2P41597 374 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 MESDQ14696 234 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 CTC1Q2NKJ3 1217 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 C15orf59Q2T9L4 293 aaPredicted RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 CCDC14Q49A88 953 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ARHGAP29Q52LW3 1261 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 SH3PXD2AQ5TCZ1 1133 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 DAB2IPQ5VWQ8 1189 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 BTBD8Q5XKL5 378 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ANKRD54Q6NXT1 300 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ZNF662Q6ZS27 426 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 GAREM2Q75VX8 874 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 RTL10Q7L3V2 364 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 GRASPQ7Z6J2 395 aaPredicted RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 MON1AQ86VX9 555 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 RHOT2Q8IXI1 618 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ELMOD1Q8N336 334 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 SMG7Q92540 1137 aaKnown RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 TCEAL4Q96EI5 215 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 CFAP57Q96MR6 1250 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 SLC2A13Q96QE2 648 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 DDX23Q9BUQ8 820 aaKnown RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 GOLPH3Q9H4A6 298 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 CCSER2Q9H7U1 834 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 POPDC2Q9HBU9 364 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 MRPL47Q9HD33 250 aaKnown RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 TLR8Q9NR97 1041 aaKnown RBP9.77□□□□□ -0.85
DDX55-208ENST00000541259 KCND1Q9NSA2 647 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ASNSD1Q9NWL6 643 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ZDHHC7Q9NXF8 308 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 CALCOCO1Q9P1Z2 691 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 UVRAGQ9P2Y5 699 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 DPP7Q9UHL4 492 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 ANAPC7Q9UJX3 599 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 C5orf42Q9H799 3197 aa9.77□□□□□ -0.85
DDX55-208ENST00000541259 MYOFQ9NZM1 2061 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 MDM4O15151 490 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 SART1O43290 800 aaKnown RBP9.76□□□□□ -0.85
DDX55-208ENST00000541259 CCP110O43303 1012 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 BUB1BO60566 1050 aaPredicted RBP9.76□□□□□ -0.85
DDX55-208ENST00000541259 XYLBO75191 536 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 TBX10O75333 385 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 MOSPD3O75425 235 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 DAB1O75553 588 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 PAPLNO95428 1278 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 RHOP08100 348 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 GLI1P08151 1106 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 NCAM1P13591 858 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 RARGP13631 454 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 GPD1P21695 349 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 MATKP42679 507 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 HADHBP55084 474 aaKnown RBP9.76□□□□□ -0.85
DDX55-208ENST00000541259 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
DDX55-208ENST00000541259 CYP4F8P98187 520 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 SLC5A9Q2M3M2 681 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 DCAF6Q58WW2 860 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 OTUD1Q5VV17 481 aaPredicted RBP9.76□□□□□ -0.85
DDX55-208ENST00000541259 EP400NLQ6ZTU2 488 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 TXLNBQ8N3L3 684 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 DEFB123Q8N688 67 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 SHKBP1Q8TBC3 707 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 ADAM32Q8TC27 787 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 OVCA2Q8WZ82 227 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 SLITRK1Q96PX8 696 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 TBCBQ99426 244 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 TSGA10Q9BZW7 698 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 SFXN1Q9H9B4 322 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 ASAH2Q9NR71 780 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 ABCC13Q9NSE7 274 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 DZANK1Q9NVP4 752 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDX55-208ENST00000541259 CLDND1Q9NY35 253 aa9.76□□□□□ -0.85
DDX55-208ENST00000541259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms