RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 DESP17661 470 aa8.82□□□□□ -1
CHD4-208ENST00000540960 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 POLR2BP30876 1174 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 PNPLA4P41247 253 aa8.82□□□□□ -1
CHD4-208ENST00000540960 SLC1A1P43005 524 aa8.82□□□□□ -1
CHD4-208ENST00000540960 NSFP46459 744 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 GALCP54803 685 aa8.82□□□□□ -1
CHD4-208ENST00000540960 TNNC1P63316 161 aa8.82□□□□□ -1
CHD4-208ENST00000540960 NOP14P78316 857 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 TFAMQ00059 246 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 AMPD2Q01433 879 aa8.82□□□□□ -1
CHD4-208ENST00000540960 DSG1Q02413 1049 aa8.82□□□□□ -1
CHD4-208ENST00000540960 GPS2Q13227 327 aa8.82□□□□□ -1
CHD4-208ENST00000540960 LRRC32Q14392 662 aa8.82□□□□□ -1
CHD4-208ENST00000540960 TMEM132DQ14C87 1099 aa8.82□□□□□ -1
CHD4-208ENST00000540960 ZNF699Q32M78 642 aa8.82□□□□□ -1
CHD4-208ENST00000540960 ZNF667Q5HYK9 610 aa8.82□□□□□ -1
CHD4-208ENST00000540960 FAM78AQ5JUQ0 283 aa8.82□□□□□ -1
CHD4-208ENST00000540960 TDRD10Q5VZ19 366 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 ACAD10Q6JQN1 1059 aa8.82□□□□□ -1
CHD4-208ENST00000540960 C11orf63Q6NUN7 778 aa8.82□□□□□ -1
CHD4-208ENST00000540960 SLC27A1Q6PCB7 646 aa8.82□□□□□ -1
CHD4-208ENST00000540960 VITQ6UXI7 678 aa8.82□□□□□ -1
CHD4-208ENST00000540960 SLFN11Q7Z7L1 901 aa8.82□□□□□ -1
CHD4-208ENST00000540960 ARHGEF19Q8IW93 802 aa8.82□□□□□ -1
CHD4-208ENST00000540960 TTC8Q8TAM2 541 aa8.82□□□□□ -1
CHD4-208ENST00000540960 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
CHD4-208ENST00000540960 EPS8L1Q8TE68 723 aa8.82□□□□□ -1
CHD4-208ENST00000540960 MAIP1Q8WWC4 291 aa8.82□□□□□ -1
CHD4-208ENST00000540960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.82□□□□□ -1
CHD4-208ENST00000540960 RUNDC3BQ96NL0 473 aa8.82□□□□□ -1
CHD4-208ENST00000540960 FCRL3Q96P31 734 aaPredicted RBP8.82□□□□□ -1
CHD4-208ENST00000540960 FDXACB1Q9BRP7 624 aaPredicted RBP8.82□□□□□ -1
CHD4-208ENST00000540960 TRIM6Q9C030 488 aaPredicted RBP8.82□□□□□ -1
CHD4-208ENST00000540960 CDT1Q9H211 546 aa8.82□□□□□ -1
CHD4-208ENST00000540960 IKZF4Q9H2S9 585 aa8.82□□□□□ -1
CHD4-208ENST00000540960 AVENQ9NQS1 362 aaPredicted RBP8.82□□□□□ -1
CHD4-208ENST00000540960 NOCTQ9UK39 431 aaKnown RBP8.82□□□□□ -1
CHD4-208ENST00000540960 GTF3C4Q9UKN8 822 aa8.82□□□□□ -1
CHD4-208ENST00000540960 STRIP2Q9ULQ0 834 aa8.82□□□□□ -1
CHD4-208ENST00000540960 PRG3Q9Y2Y8 225 aaPredicted RBP8.82□□□□□ -1
CHD4-208ENST00000540960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.82□□□□□ -1
CHD4-208ENST00000540960 PCDHB4Q9Y5E5 795 aa8.82□□□□□ -1
CHD4-208ENST00000540960 SCINQ9Y6U3 715 aa8.82□□□□□ -1
CHD4-208ENST00000540960 CCDC163A0A0D9SF12 145 aa8.81□□□□□ -1
CHD4-208ENST00000540960 GOLGA6L10A0A0M3HER8 536 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CCDC151A5D8V7 595 aa8.81□□□□□ -1
CHD4-208ENST00000540960 TRABD2BA6NFA1 517 aa8.81□□□□□ -1
CHD4-208ENST00000540960 SLC38A8A6NNN8 435 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CCDC188H7C350 402 aa8.81□□□□□ -1
CHD4-208ENST00000540960 ARNTLO00327 626 aa8.81□□□□□ -1
CHD4-208ENST00000540960 FAM189A1O60320 539 aa8.81□□□□□ -1
CHD4-208ENST00000540960 TSPAN1O60635 241 aa8.81□□□□□ -1
CHD4-208ENST00000540960 PALMO75781 387 aa8.81□□□□□ -1
CHD4-208ENST00000540960 RHOBTB1O94844 696 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CALB1P05937 261 aa8.81□□□□□ -1
CHD4-208ENST00000540960 FTH1P19P0C7X4 201 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CEBPBP17676 345 aa8.81□□□□□ -1
CHD4-208ENST00000540960 ENGP17813 658 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CSRP3P50461 194 aa8.81□□□□□ -1
CHD4-208ENST00000540960 DRP2Q13474 957 aa8.81□□□□□ -1
CHD4-208ENST00000540960 ELF2Q15723 593 aa8.81□□□□□ -1
CHD4-208ENST00000540960 PABPC1LQ4VXU2 614 aaKnown RBP8.81□□□□□ -1
CHD4-208ENST00000540960 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
CHD4-208ENST00000540960 GJB7Q6PEY0 223 aa8.81□□□□□ -1
CHD4-208ENST00000540960 TMCO3Q6UWJ1 677 aa8.81□□□□□ -1
CHD4-208ENST00000540960 RSRC2Q7L4I2 434 aaKnown RBP8.81□□□□□ -1
CHD4-208ENST00000540960 DAAM2Q86T65 1068 aa8.81□□□□□ -1
CHD4-208ENST00000540960 SLCO6A1Q86UG4 719 aa8.81□□□□□ -1
CHD4-208ENST00000540960 TMEM35BQ8NCS4 154 aa8.81□□□□□ -1
CHD4-208ENST00000540960 BEST2Q8NFU1 509 aa8.81□□□□□ -1
CHD4-208ENST00000540960 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
CHD4-208ENST00000540960 SEMA4DQ92854 862 aa8.81□□□□□ -1
CHD4-208ENST00000540960 IRF7Q92985 503 aa8.81□□□□□ -1
CHD4-208ENST00000540960 FAM212AQ96EL1 285 aa8.81□□□□□ -1
CHD4-208ENST00000540960 ZBTB45Q96K62 511 aaPredicted RBP8.81□□□□□ -1
CHD4-208ENST00000540960 KREMEN1Q96MU8 473 aa8.81□□□□□ -1
CHD4-208ENST00000540960 OSBPL9Q96SU4 736 aa8.81□□□□□ -1
CHD4-208ENST00000540960 ARID3AQ99856 593 aa8.81□□□□□ -1
CHD4-208ENST00000540960 NCAPGQ9BPX3 1015 aa8.81□□□□□ -1
CHD4-208ENST00000540960 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
CHD4-208ENST00000540960 GPR88Q9GZN0 384 aa8.81□□□□□ -1
CHD4-208ENST00000540960 PDZD7Q9H5P4 517 aa8.81□□□□□ -1
CHD4-208ENST00000540960 ARFGAP3Q9NP61 516 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CHST7Q9NS84 486 aa8.81□□□□□ -1
CHD4-208ENST00000540960 CTTNBP2NLQ9P2B4 639 aa8.81□□□□□ -1
CHD4-208ENST00000540960 TNRC6BQ9UPQ9 1833 aaKnown RBP8.81□□□□□ -1
CHD4-208ENST00000540960 ARHGEF37A1IGU5 675 aa8.8□□□□□ -1
CHD4-208ENST00000540960 CCDC66A2RUB6 948 aa8.8□□□□□ -1
CHD4-208ENST00000540960 RCCD1A6NED2 376 aa8.8□□□□□ -1
CHD4-208ENST00000540960 UPK3BL1B0FP48 263 aa8.8□□□□□ -1
CHD4-208ENST00000540960 UPK3BL2E5RIL1 263 aa8.8□□□□□ -1
CHD4-208ENST00000540960 ABLIM1O14639 778 aa8.8□□□□□ -1
CHD4-208ENST00000540960 SLC28A2O43868 658 aa8.8□□□□□ -1
CHD4-208ENST00000540960 ATP1A1P05023 1023 aaKnown RBP8.8□□□□□ -1
CHD4-208ENST00000540960 CYP1A2P05177 515 aa8.8□□□□□ -1
CHD4-208ENST00000540960 C8AP07357 584 aa8.8□□□□□ -1
CHD4-208ENST00000540960 ARF4P18085 180 aaPredicted RBP8.8□□□□□ -1
CHD4-208ENST00000540960 CYP3A5P20815 502 aa8.8□□□□□ -1
CHD4-208ENST00000540960 GNA15P30679 374 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms