RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PHOX2BQ99453 314 aa17.7■□□□□ 0.42
CD9-209ENST00000540891 P2RY13Q9BPV8 354 aa17.7■□□□□ 0.42
CD9-209ENST00000540891 MIS12Q9H081 205 aa17.7■□□□□ 0.42
CD9-209ENST00000540891 FAM86C1Q9NVL1 165 aa17.7■□□□□ 0.42
CD9-209ENST00000540891 MARCH2Q9P0N8 246 aa17.7■□□□□ 0.42
CD9-209ENST00000540891 TJP2Q9UDY2 1190 aa17.7■□□□□ 0.42
CD9-209ENST00000540891 F8VZ95 297 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 EGFP01133 1207 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 TPM2P07951 284 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 PTMSP20962 102 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
CD9-209ENST00000540891 ZNF165P49910 485 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 AMPD2Q01433 879 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 NR1H3Q13133 447 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 PDCLQ13371 301 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 SYCP1Q15431 976 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 MAMSTRQ6ZN01 415 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 RSRC2Q7L4I2 434 aaKnown RBP17.69■□□□□ 0.42
CD9-209ENST00000540891 TMEM110Q86TL2 294 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 C12orf40Q86WS4 652 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 PASD1Q8IV76 773 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 ANKRD20A12PQ8NF67 263 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 CD101Q93033 1021 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 ABCC13Q9NSE7 274 aa17.69■□□□□ 0.42
CD9-209ENST00000540891 FAM207AQ9NSI2 230 aaPredicted RBP17.69■□□□□ 0.42
CD9-209ENST00000540891 SLC12A8A0AV02 714 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 E5RJQ4 531 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 PAPSS1O43252 624 aaPredicted RBP17.68■□□□□ 0.42
CD9-209ENST00000540891 FBXO21O94952 628 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 FYNP06241 537 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 ADH5P11766 374 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 ACADSBP45954 432 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 SLC6A11P48066 632 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 COG7P83436 770 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 GOLGA8FQ08AF8 430 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 GOLGA8DPQ0D2H9 430 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 MESP2Q0VG99 397 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 GRSF1Q12849 480 aaKnown RBP eCLIP17.68■□□□□ 0.42
CD9-209ENST00000540891 PKN3Q6P5Z2 889 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 TMEM25Q86YD3 366 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 SCUBE3Q8IX30 993 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 ATOH1Q92858 354 aaPredicted RBP17.68■□□□□ 0.42
CD9-209ENST00000540891 FAM122AQ96E09 287 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 P2RY11Q96G91 374 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 IER2Q9BTL4 223 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 LHX5Q9H2C1 402 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 PRMT8Q9NR22 394 aaPredicted RBP17.68■□□□□ 0.42
CD9-209ENST00000540891 SPHK2Q9NRA0 654 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 C2orf42Q9NWW7 574 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 SFMBT1Q9UHJ3 866 aa17.68■□□□□ 0.42
CD9-209ENST00000540891 LSM7Q9UK45 103 aaKnown RBP17.68■□□□□ 0.42
CD9-209ENST00000540891 CACNA1HO95180 2353 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 SMTNL1A8MU46 457 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 HOXC11O43248 304 aaPredicted RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 LAMTOR5O43504 91 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 ADH1CP00326 375 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 LTFP02788 710 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 HMBSP08397 361 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 SP9P0CG40 484 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 CYP11B1P15538 503 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 DRD1P21728 446 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 JAM2P57087 298 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 POLR2FP61218 127 aaKnown RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 UBXN1Q04323 297 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 TRIP4Q15650 581 aaPredicted RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 MSANTD2Q6P1R3 559 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 ETFBKMTQ8IXQ9 262 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 SYNPOQ8N3V7 929 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 C1orf131Q8NDD1 294 aaKnown RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 PIWIL1Q96J94 861 aaKnown RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 ERGIC2Q96RQ1 377 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 CPXM1Q96SM3 734 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 OLA1Q9NTK5 396 aaKnown RBP17.67■□□□□ 0.42
CD9-209ENST00000540891 STRIP2Q9ULQ0 834 aa17.67■□□□□ 0.42
CD9-209ENST00000540891 ANTXRLA6NF34 631 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 TDGF1P13385 188 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 CORO1AP31146 461 aaKnown RBP17.66■□□□□ 0.42
CD9-209ENST00000540891 BPIFB4P59827 614 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 SATB1Q01826 763 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 GAD2Q05329 585 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 TSSK4Q6SA08 328 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 NOP9Q86U38 636 aaKnown RBP17.66■□□□□ 0.42
CD9-209ENST00000540891 FMNL3Q8IVF7 1028 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 SFTPA1Q8IWL2 248 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 PHTF2Q8N3S3 785 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 SPEM1Q8N4L4 309 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 RNF139Q8WU17 664 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 NLRC4Q9NPP4 1024 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 MARK1Q9P0L2 795 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 FBXO4Q9UKT5 387 aa17.66■□□□□ 0.42
CD9-209ENST00000540891 AGO1Q9UL18 857 aaKnown RBP17.66■□□□□ 0.42
CD9-209ENST00000540891 MYOFQ9NZM1 2061 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 TEX33O43247 280 aa17.65■□□□□ 0.42
CD9-209ENST00000540891 MSI1O43347 362 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms