RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 PRRT4C9JH25 899 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 CACNG3O60359 315 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 TOP3BO95985 862 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 RARGP13631 454 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 CD58P19256 250 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 SPINK2P20155 84 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 CSRP1P21291 193 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 NTSR1P30989 418 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 ATP5C1P36542 298 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 RPL6Q02878 288 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 LMAN2Q12907 356 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 PEAR1Q5VY43 1037 aaPredicted RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 KIAA1211LQ6NV74 962 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 MMRN2Q9H8L6 949 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 CYP3A43Q9HB55 503 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 MARK1Q9P0L2 795 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 LSM7Q9UK45 103 aaKnown RBP17.12■□□□□ 0.33
TRIM65-203ENST00000540812 RAD54BQ9Y620 910 aa17.12■□□□□ 0.33
TRIM65-203ENST00000540812 ZZEF1O43149 2961 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 MAPK13O15264 365 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 CILPO75339 1184 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 MYL1P05976 194 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 CEACAM1P13688 526 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 ENGP17813 658 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 NR2F2P24468 414 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 KIF11P52732 1056 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 BECN1Q14457 450 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 C10orf120Q5SQS8 335 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 SLC23A3Q6PIS1 610 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 NUDT18Q6ZVK8 323 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 SCD5Q86SK9 330 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
TRIM65-203ENST00000540812 BHMTQ93088 406 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 XPO6Q96QU8 1125 aaKnown RBP17.11■□□□□ 0.33
TRIM65-203ENST00000540812 NIF3L1Q9GZT8 377 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 CD93Q9NPY3 652 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 WDR35Q9P2L0 1181 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 DNMT3LQ9UJW3 386 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 MAPK8IP1Q9UQF2 711 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
TRIM65-203ENST00000540812 C1QTNF9BB2RNN3 333 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 PROS1P07225 676 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 CISD3P0C7P0 127 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 C1QTNF9P0C862 333 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 NDUFV2P19404 249 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 SYKP43405 635 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 NDUFA8P51970 172 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 NFIL3Q16649 462 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 KLHDC10Q6PID8 442 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 Q6ZNB5 142 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 INTS8Q75QN2 995 aaKnown RBP17.1■□□□□ 0.33
TRIM65-203ENST00000540812 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 CHPFQ8IZ52 775 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 GABRG3Q99928 467 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 SLC6A17Q9H1V8 727 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 CACNA2D2Q9NY47 1150 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 PLK2Q9NYY3 685 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 NAGPAQ9UK23 515 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 CYP8B1Q9UNU6 501 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 AKAP13Q12802 2813 aa17.1■□□□□ 0.33
TRIM65-203ENST00000540812 SPEGQ15772 3267 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 FAM237AA0A1B0GTK4 181 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 AP5Z1O43299 807 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 STC2O76061 302 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 KLKB1P03952 638 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 CFIP05156 583 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 DGKGP49619 791 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 DPYDQ12882 1025 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
TRIM65-203ENST00000540812 SLC36A4Q6YBV0 504 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 SLC41A1Q8IVJ1 513 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 SEMA4DQ92854 862 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 SPATA32Q96LK8 384 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 PCNX2A6NKB5 2137 aa17.09■□□□□ 0.33
TRIM65-203ENST00000540812 WASH3PC4AMC7 463 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 KIF20AO95235 890 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 KRT13P13646 458 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 TRIM21P19474 475 aaKnown RBP17.08■□□□□ 0.32
TRIM65-203ENST00000540812 HOXD12P35452 270 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 DPP6P42658 865 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 ZNF33AQ06730 810 aa17.08■□□□□ 0.32
TRIM65-203ENST00000540812 DUOXA1Q1HG43 343 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms