RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 UBE4BO95155 1302 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 PTPRQQ9UMZ3 2332 aa7.73□□□□□ -1.17
YBX3-209ENST00000540747 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 PTPRBP23467 1997 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 KCNJ18B7U540 433 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 WASH3PC4AMC7 463 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 VNN1O95497 513 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 TBX18O95935 607 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 ACO1P21399 889 aaKnown RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 CD6P30203 668 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 RDXP35241 583 aaKnown RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 TXLNAP40222 546 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 NASPP49321 788 aaPredicted RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 CDH8P55286 799 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 SNRPFP62306 86 aaKnown RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 CAMK2BQ13554 666 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 COL28A1Q2UY09 1125 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 ANO4Q32M45 955 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 PLEKHG6Q3KR16 790 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 FUT11Q495W5 492 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 FAM26FQ5R3K3 315 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 KLHDC10Q6PID8 442 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 STXBP4Q6ZWJ1 553 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 TMPRSS7Q7RTY8 843 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 GPRIN1Q7Z2K8 1008 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 CHPFQ8IZ52 775 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 CRYBG2Q8N1P7 616 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 XXYLT1Q8NBI6 393 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 CADM4Q8NFZ8 388 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 TMEM174Q8WUU8 243 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 FOXJ1Q92949 421 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 SYAP1Q96A49 352 aaPredicted RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 USP28Q96RU2 1077 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 BBS2Q9BXC9 721 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 PANK2Q9BZ23 570 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 MKRN2Q9H000 416 aaKnown RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 IL21RQ9HBE5 538 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 SCUBE2Q9NQ36 999 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 KRT82Q9NSB4 513 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 WDR35Q9P2L0 1181 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 HMGXB4Q9UGU5 601 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 SCML2Q9UQR0 700 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 R3HCC1Q9Y3T6 440 aaKnown RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 KNTC1P50748 2209 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 GOLGA4Q13439 2230 aaKnown RBP7.72□□□□□ -1.17
YBX3-209ENST00000540747 ATP8B3O60423 1300 aa7.72□□□□□ -1.17
YBX3-209ENST00000540747 CKAP5Q14008 2032 aa7.71□□□□□ -1.17
YBX3-209ENST00000540747 A0A1B0GTW7 788 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 VPS37CA5D8V6 355 aaPredicted RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 LRRIQ3A6PVS8 624 aaPredicted RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 NEDD8-MDP1E9PL57 170 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 AP1G2O75843 785 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 KLKB1P03952 638 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 C4BPAP04003 597 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 IRF1P10914 325 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 CCDC130P13994 396 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 TNNI1P19237 187 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 MAOBP27338 520 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 DGKGP49619 791 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 CASP4P49662 377 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 CYP2J2P51589 502 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 ZNF132P52740 706 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 MFAP3P55082 362 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 WDR45BQ5MNZ6 344 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 SYCP2LQ5T4T6 812 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 FYB2Q5VWT5 728 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 C19orf48Q6RUI8 117 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 NUDT18Q6ZVK8 323 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 ZNF276Q8N554 614 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 PDILTQ8N807 584 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 PNPLA1Q8N8W4 532 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 RDH13Q8NBN7 331 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 MDM1Q8TC05 714 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 SLC2A14Q8TDB8 520 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 PARD3BQ8TEW8 1205 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 ELMO3Q96BJ8 720 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 CCDC127Q96BQ5 260 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 TOE1Q96GM8 510 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 PIWIL1Q96J94 861 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 TNIP3Q96KP6 325 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 XPO6Q96QU8 1125 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 C7orf25Q9BPX7 421 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 CUEDC2Q9H467 287 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 FBXO44Q9H4M3 255 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 CCDC86Q9H6F5 360 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 UPF2Q9HAU5 1272 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 NMUR1Q9HB89 426 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 ITM2CQ9NQX7 267 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.71□□□□□ -1.18
YBX3-209ENST00000540747 DMAC2Q9NW81 257 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 THAP10Q9P2Z0 257 aaPredicted RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 FNDC3AQ9Y2H6 1198 aaKnown RBP7.71□□□□□ -1.18
YBX3-209ENST00000540747 PCDHGB2Q9Y5G2 931 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 SLCO1B1Q9Y6L6 691 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 STON1Q9Y6Q2 735 aa7.71□□□□□ -1.18
YBX3-209ENST00000540747 MGAQ8IWI9 3026 aa7.7□□□□□ -1.18
YBX3-209ENST00000540747 METTL12A8MUP2 240 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms