RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ATRIPQ8WXE1 791 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 SLC22A12Q96S37 553 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 ATXN3LQ9H3M9 355 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 IMPACTQ9P2X3 320 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 ADAMTS1Q9UHI8 967 aa17.52■□□□□ 0.4
UBC-208ENST00000540700 MRPS23Q9Y3D9 190 aaKnown RBP17.52■□□□□ 0.4
UBC-208ENST00000540700 DOCK8Q8NF50 2099 aa17.52■□□□□ 0.39
UBC-208ENST00000540700 KANSL1LA0AUZ9 987 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 ZBED1O96006 694 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 FYNP06241 537 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 CD72P21854 359 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 TXNDC8Q6A555 127 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 OLFML1Q6UWY5 402 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 MMS22LQ6ZRQ5 1243 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 MON1BQ7L1V2 547 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 XYLT1Q86Y38 959 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 SIX6OS1Q8N1H7 587 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 SCML4Q8N228 414 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 C11orf70Q9BRQ4 267 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 FBXO44Q9H4M3 255 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
UBC-208ENST00000540700 CYLDQ9NQC7 956 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 CNGB3Q9NQW8 809 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 UXTQ9UBK9 157 aaPredicted RBP17.51■□□□□ 0.39
UBC-208ENST00000540700 CDV3Q9UKY7 258 aaKnown RBP17.51■□□□□ 0.39
UBC-208ENST00000540700 CEP83Q9Y592 693 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 BZW2Q9Y6E2 419 aaKnown RBP17.51■□□□□ 0.39
UBC-208ENST00000540700 MYO16Q9Y6X6 1858 aa17.51■□□□□ 0.39
UBC-208ENST00000540700 ZNF638Q14966 1978 aaKnown RBP17.51■□□□□ 0.39
UBC-208ENST00000540700 SSU72P8A0A1W2PR75 194 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 DCDC2BA2VCK2 349 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 FAM170BA6NMN3 283 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 ZNF263O14978 683 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 GJB6O95452 261 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 CDC25CP30307 473 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 ACADSBP45954 432 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 CDK17Q00537 523 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 GFPT1Q06210 699 aaPredicted RBP17.5■□□□□ 0.39
UBC-208ENST00000540700 MLF2Q15773 248 aaPredicted RBP17.5■□□□□ 0.39
UBC-208ENST00000540700 ZNF528Q3MIS6 628 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 SLC44A4Q53GD3 710 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 SNX30Q5VWJ9 437 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 ACAD10Q6JQN1 1059 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 ERICH1Q86X53 443 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 PHF13Q86YI8 300 aaPredicted RBP17.5■□□□□ 0.39
UBC-208ENST00000540700 LEMD2Q8NC56 503 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 FGF13Q92913 245 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 PANX2Q96RD6 677 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 SLC46A2Q9BY10 475 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 CCSER2Q9H7U1 834 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 NUDT5Q9UKK9 219 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 FBXO4Q9UKT5 387 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 USP18Q9UMW8 372 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 ZFHX4Q86UP3 3567 aa17.5■□□□□ 0.39
UBC-208ENST00000540700 COL4A3Q01955 1670 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 TCRBV5S1A1TA0A578 114 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 SDHBP21912 280 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 ZXDBP98169 803 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 MTF1Q14872 753 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 GPR158Q5T848 1215 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 TSSK4Q6SA08 328 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 MCOLN2Q8IZK6 566 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 RIN3Q8TB24 985 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 OVCA2Q8WZ82 227 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 MCRS1Q96EZ8 462 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 PDLIM2Q96JY6 352 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 SLITRK1Q96PX8 696 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 CYP2S1Q96SQ9 504 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBC-208ENST00000540700 RNF38Q9H0F5 515 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 TRPM5Q9NZQ8 1165 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 NAGPAQ9UK23 515 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 CDH7Q9ULB5 785 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 SMG5Q9UPR3 1016 aaKnown RBP17.49■□□□□ 0.39
UBC-208ENST00000540700 PCDHGA2Q9Y5H1 932 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 CFAP47Q6ZTR5 3102 aa17.49■□□□□ 0.39
UBC-208ENST00000540700 SOWAHDA6NJG2 315 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 ZNF197O14709 1029 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 MDM4O15151 490 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 ATMINO43313 823 aaPredicted RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 GRAP2O75791 330 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 TBX18O95935 607 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 OAS1P00973 400 aaKnown RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 NSFP46459 744 aaKnown RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 YWHAGP61981 247 aaKnown RBP eCLIP17.48■□□□□ 0.392e-8■□□□□ 11.1
UBC-208ENST00000540700 OR6B2Q6IFH4 312 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 TRNP1Q6NT89 227 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 RAD9BQ6WBX8 426 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 MON1AQ86VX9 555 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 GPR161Q8N6U8 529 aaKnown RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 MAB21L3Q8N8X9 362 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 C18orf8Q96DM3 657 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 RSPRY1Q96DX4 576 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 NOX5Q96PH1 765 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 PACSIN1Q9BY11 444 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 SMG9Q9H0W8 520 aaKnown RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 ISCUQ9H1K1 167 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms