RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TMEM51Q9NW97 253 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 MARK1Q9P0L2 795 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 BCCIPQ9P287 314 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDCA3-208ENST00000540683 MAN1B1Q9UKM7 699 aa10.91□□□□□ -0.66
CDCA3-208ENST00000540683 SPAG17Q6Q759 2223 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 DMDP11532 3685 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 A0A1W2PQH9 124 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 TYW5A2RUC4 315 aaKnown RBP10.9□□□□□ -0.66
CDCA3-208ENST00000540683 HHLA1C9JL84 531 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 K7EQS6 105 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 GFRA2O00451 464 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 TIMM44O43615 452 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 CACNG3O60359 315 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 ZNF217O75362 1048 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 BEST1O76090 585 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 FBXO21O94952 628 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 EPN2O95208 641 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 LATS1O95835 1130 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 AFPP02771 609 aaKnown RBP10.9□□□□□ -0.66
CDCA3-208ENST00000540683 IRF1P10914 325 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDCA3-208ENST00000540683 MTA1Q13330 715 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 TPD52L1Q16890 204 aaPredicted RBP10.9□□□□□ -0.66
CDCA3-208ENST00000540683 CBWD6Q4V339 395 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 RAB41Q5JT25 222 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 CBWD3Q5JTY5 395 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 CBWD5Q5RIA9 395 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 PM20D1Q6GTS8 502 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 KLHL10Q6JEL2 608 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 SLC36A4Q6YBV0 504 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 PIGZQ86VD9 579 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 BBS7Q8IWZ6 715 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 TERB1Q8NA31 727 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 MLKLQ8NB16 471 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 RIN3Q8TB24 985 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 KCTD13Q8WZ19 329 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 SEMA4DQ92854 862 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 EEF2KMTQ96G04 330 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 TWNKQ96RR1 684 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 DDX50Q9BQ39 737 aaKnown RBP10.9□□□□□ -0.66
CDCA3-208ENST00000540683 SLC2A11Q9BYW1 496 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 ABCC13Q9NSE7 274 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 SEMA4GQ9NTN9 838 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 MARCH2Q9P0N8 246 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
CDCA3-208ENST00000540683 PCDHB4Q9Y5E5 795 aa10.9□□□□□ -0.66
CDCA3-208ENST00000540683 RALGAPA1Q6GYQ0 2036 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 NEDD8-MDP1E9PL57 170 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 MAP3K13O43283 966 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TULP3O75386 442 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 KLF8O95600 359 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 ZNF806P0C7X5 589 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TYRP14679 529 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 NTSR1P30989 418 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 GBP1P32455 592 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 ACADSBP45954 432 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 DGKGP49619 791 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TKTL1P51854 596 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 LIMK1P53667 647 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 MFAP3P55082 362 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 SEC13P55735 322 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 ZXDBP98169 803 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 SPEM2Q0P670 501 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 STARD3Q14849 445 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 EIF4HQ15056 248 aaKnown RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 CNGA2Q16280 664 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 RSPO4Q2I0M5 234 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 GOLGA7BQ2TAP0 167 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 AASDHQ4L235 1098 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 CT47A1Q5JQC4 288 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 C10orf76Q5T2E6 689 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 IL31Q6EBC2 164 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TTI2Q6NXR4 508 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TMEM270Q6UE05 265 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 LCLAT1Q6UWP7 414 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 PRR23CQ6ZRP0 262 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 LPCAT2Q7L5N7 544 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 MIB1Q86YT6 1006 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 CCDC117Q8IWD4 279 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 UNC45BQ8IWX7 931 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 ETFBKMTQ8IXQ9 262 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 ZNF513Q8N8E2 541 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TATDN2Q93075 761 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 HSFY1Q96LI6 401 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 FBRSL1Q9HCM7 1045 aaKnown RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
CDCA3-208ENST00000540683 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 RWDD2AQ9UIY3 292 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 RASAL2Q9UJF2 1139 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 TSPAN16Q9UKR8 245 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 CTNND2Q9UQB3 1225 aa10.89□□□□□ -0.67
CDCA3-208ENST00000540683 GTPBP10A4D1E9 387 aaKnown RBP10.88□□□□□ -0.67
CDCA3-208ENST00000540683 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
CDCA3-208ENST00000540683 STC2O76061 302 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms