RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ZNF397Q8NF99 534 aaPredicted RBP7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 BPIFB1Q8TDL5 484 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 SH3RF2Q8TEC5 729 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 IPO4Q8TEX9 1081 aaKnown RBP7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 CPLX3Q8WVH0 158 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 CPA5Q8WXQ8 436 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 SYN2Q92777 582 aaPredicted RBP7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 ASIC4Q96FT7 647 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 MRFAP1L1Q96HT8 127 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 CDK5RAP1Q96SZ6 601 aaKnown RBP7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 PCDHB18PQ96TA0 734 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 AGPAT1Q99943 283 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 NUCKS1Q9H1E3 243 aaKnown RBP7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 PDCL3Q9H2J4 239 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 SLC2A4RGQ9NR83 387 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 ABCC13Q9NSE7 274 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 NUDT5Q9UKK9 219 aa7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 LUC7L2Q9Y383 392 aaKnown RBP7.31□□□□□ -1.24
LPCAT3-209ENST00000540060 TECTAO75443 2155 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 NYNRINQ9P2P1 1898 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 FAM170AA1A519 330 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 PI4K2BG5E9Z4 385 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 LEFTY2O00292 366 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MDM4O15151 490 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 CHADO15335 359 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 GREM1O60565 184 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 FYNP06241 537 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 RALAP11233 206 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MMP8P22894 467 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 GDI1P31150 447 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 HNRNPH3P31942 346 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ATP5C1P36542 298 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 SCNN1AP37088 669 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 GSCP56915 257 aaPredicted RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 GPC5P78333 572 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ZXDAP98168 799 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 KLHL30Q0D2K2 578 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 PTP4A2Q12974 167 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TBX2Q13207 712 aaPredicted RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MTF1Q14872 753 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TAF5Q15542 800 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ARHGAP29Q52LW3 1261 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 C2CD6Q53TS8 623 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TDRD12Q587J7 1177 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 C10orf120Q5SQS8 335 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 BTBD8Q5XKL5 378 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MSANTD2Q6P1R3 559 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MMS22LQ6ZRQ5 1243 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TOGARAM2Q6ZUX3 1019 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MON1BQ7L1V2 547 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 BEND5Q7L4P6 421 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 SLC26A9Q7LBE3 791 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ZNF571Q7Z3V5 609 aaPredicted RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TMC6Q7Z403 805 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TADA2BQ86TJ2 420 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ERICH1Q86X53 443 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 DDX42Q86XP3 938 aaKnown RBP eCLIP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 XYLT1Q86Y38 959 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 PHF13Q86YI8 300 aaPredicted RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ZDHHC17Q8IUH5 632 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 KIAA1958Q8N8K9 716 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MSANTD4Q8NCY6 345 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 EDEM1Q92611 657 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 GOLGA1Q92805 767 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 EDAQ92838 391 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 DNASE1L2Q92874 299 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 C11orf70Q9BRQ4 267 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TRIM62Q9BVG3 475 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 TRMT61BQ9BVS5 477 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 KLF16Q9BXK1 252 aaPredicted RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 NACA2Q9H009 215 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 SYNCQ9H7C4 482 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 POPDC2Q9HBU9 364 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 OLA1Q9NTK5 396 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ABHD10Q9NUJ1 306 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 SEPT11Q9NVA2 429 aaKnown RBP7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 ASNSD1Q9NWL6 643 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 CFAP97Q9P2B7 532 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 RASAL2Q9UJF2 1139 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 DNMT3LQ9UJW3 386 aa7.3□□□□□ -1.24
LPCAT3-209ENST00000540060 MYOFQ9NZM1 2061 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 WDR87Q6ZQQ6 2873 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 E2F8A0AVK6 867 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 ZNF263O14978 683 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 MSI1O43347 362 aaKnown RBP7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 HSF2BPO75031 334 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 DAB1O75553 588 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 STC2O76061 302 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 IGLV3-25P01717 112 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 SERPING1P05155 500 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 GLI1P08151 1106 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 PLEKP08567 350 aaPredicted RBP7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 IRF1P10914 325 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 SKILP12757 684 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 NCAM1P13591 858 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 ALADP13716 330 aa7.29□□□□□ -1.24
LPCAT3-209ENST00000540060 NSFP46459 744 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms