RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 XPO4Q9C0E2 1151 aaKnown RBP6.82□□□□□ -1.32
SNHG1-212ENST00000539975 HSD3B7Q9H2F3 369 aa6.82□□□□□ -1.32
SNHG1-212ENST00000539975 TLR8Q9NR97 1041 aaKnown RBP6.82□□□□□ -1.32
SNHG1-212ENST00000539975 SEPT11Q9NVA2 429 aaKnown RBP6.82□□□□□ -1.32
SNHG1-212ENST00000539975 GDE1Q9NZC3 331 aa6.82□□□□□ -1.32
SNHG1-212ENST00000539975 DNMT3BQ9UBC3 853 aaKnown RBP6.82□□□□□ -1.32
SNHG1-212ENST00000539975 HMGXB4Q9UGU5 601 aa6.82□□□□□ -1.32
SNHG1-212ENST00000539975 MYO6Q9UM54 1294 aa6.82□□□□□ -1.32
SNHG1-212ENST00000539975 FHOD1Q9Y613 1164 aa6.82□□□□□ -1.32
SNHG1-212ENST00000539975 GBF1Q92538 1859 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 CITO14578 2027 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 O00370 1275 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 XPO1O14980 1071 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 TEX33O43247 280 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 GFPT2O94808 682 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 RALAP11233 206 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 EPXP11678 715 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 DESP17661 470 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 ATF6P18850 670 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 BRD2P25440 801 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 KCNQ1P51787 676 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 SLC5A3P53794 718 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 APBA1Q02410 837 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 ASIC2Q16515 512 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 MEA1Q16626 185 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 FIGNQ5HY92 759 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 SDHAF4Q5VUM1 108 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 MTSS1LQ765P7 747 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 RSRC2Q7L4I2 434 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 ADHFE1Q8IWW8 467 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 YAF2Q8IY57 180 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 FAM71AQ8IYT1 594 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 TTC9BQ8N6N2 239 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 GALNT6Q8NCL4 622 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 UBA3Q8TBC4 463 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 RNF139Q8WU17 664 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 EDARADDQ8WWZ3 215 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 OVCA2Q8WZ82 227 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 KAT5Q92993 513 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 NXPE3Q969Y0 559 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 ZNF707Q96C28 371 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 MCRS1Q96EZ8 462 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 TRMT2BQ96GJ1 504 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 KCNK16Q96T55 309 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 POMKQ9H5K3 350 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 CSNK1G1Q9HCP0 422 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 TRPC7Q9HCX4 862 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 SIX2Q9NPC8 291 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 HCFC1R1Q9NWW0 138 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 THG1LQ9NWX6 298 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 HCN2Q9UL51 889 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 CDH7Q9ULB5 785 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 CNTN6Q9UQ52 1028 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
SNHG1-212ENST00000539975 BZW2Q9Y6E2 419 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 RANBP2P49792 3224 aaKnown RBP6.81□□□□□ -1.32
SNHG1-212ENST00000539975 TRAV19A0A0A6YYK7 116 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ANKRD62A6NC57 917 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 GOLGA6L3A6NEY3 463 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CAPN9O14815 690 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SIN3BO75182 1162 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 NOL4O94818 638 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 FBXO21O94952 628 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 LSM8O95777 96 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ZBED1O96006 694 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CKMP06732 381 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 USP17L7P0C7H9 530 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 LAMP2P13473 410 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 LCP1P13796 627 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 IL9P15248 144 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CYP11B1P15538 503 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 EPB42P16452 691 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 PFKLP17858 780 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 HDCP19113 662 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TNFAIP3P21580 790 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SP100P23497 879 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 NSFP46459 744 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 GPR15P49685 360 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 KLK7P49862 253 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TKTL1P51854 596 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ZNF132P52740 706 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ZBED6P86452 979 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CDR2Q01850 454 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 PDE4CQ08493 712 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 KLHL30Q0D2K2 578 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SFSWAPQ12872 951 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TAF10Q12962 218 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TDRD12Q587J7 1177 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 HECTD3Q5T447 861 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 GPR158Q5T848 1215 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TAF3Q5VWG9 929 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 BTBD8Q5XKL5 378 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CC2D1AQ6P1N0 951 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SARM1Q6SZW1 724 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CLEC20AQ6ZU45 233 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms