RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 LGALS13Q9UHV8 139 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 SLC24A2Q9UI40 661 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 PCDHB8Q9UN66 801 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 AP4E1Q9UPM8 1137 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 SCN1AP35498 2009 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 GRIN2DO15399 1336 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TLDC2A0PJX2 215 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PIK3R2O00459 728 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 HOXA2O43364 376 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PARNO95453 639 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 ACSL3O95573 720 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 GSTA2P09210 222 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 CD48P09326 243 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 CKBP12277 381 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PECAM1P16284 738 aaPredicted RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 CYP2F1P24903 491 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 TKTP29401 623 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 HPDP32754 393 aaPredicted RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 LSP1P33241 339 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 CYP2C18P33260 490 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 HTR7P34969 479 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 CHKAP35790 457 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 TKTL1P51854 596 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 RNASELQ05823 741 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 ADCY1Q08828 1119 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 SCAPQ12770 1279 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 TRIM32Q13049 653 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 KLHL38Q2WGJ6 581 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 TNFAIP8L3Q5GJ75 292 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 RAB41Q5JT25 222 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 ZNF618Q5T7W0 954 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PRPF38BQ5VTL8 546 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 FAM171BQ6P995 826 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 DEFB106AQ8N104 65 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 TMEM130Q8N3G9 435 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PLD5Q8N7P1 536 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 CD99L2Q8TCZ2 262 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 APBB2Q92870 758 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 LRRC39Q96DD0 335 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PIWIL1Q96J94 861 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 SUSD3Q96L08 255 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 OXCT2Q9BYC2 517 aaPredicted RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 B3GNT5Q9BYG0 378 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 BRD8Q9H0E9 1235 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 EPN3Q9H201 632 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 ADAM7Q9H2U9 754 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 DHX35Q9H5Z1 703 aaKnown RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 NRDE2Q9H7Z3 1164 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 SAYSD1Q9NPB0 183 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 DMAP1Q9NPF5 467 aaPredicted RBP10.57□□□□□ -0.72
SPARC-209ENST00000539687 SLC12A6Q9UHW9 1150 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 PHF24Q9UPV7 400 aa10.57□□□□□ -0.72
SPARC-209ENST00000539687 TRIP12Q14669 1992 aaPredicted RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 CASTOR2A6NHX0 329 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 E7ESA3 106 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 ARVCFO00192 962 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 PPP1R12AO14974 1030 aaPredicted RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 NCAM2O15394 837 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 FKTNO75072 461 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 SHBGP04278 402 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 INHAP05111 366 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 ACAT1P24752 427 aaKnown RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 L1CAMP32004 1257 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 RPL22P35268 128 aaKnown RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 MAGEA6P43360 314 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 MMP13P45452 471 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 HCAR3P49019 387 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 ATP1A2P50993 1020 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 MAP3K7CLP57077 242 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 DAOAP59103 153 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 FAM189BP81408 668 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 DEUP1Q05D60 604 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 AUHQ13825 339 aaKnown RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 NFE2Q16621 373 aaPredicted RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 TIGD5Q53EQ6 642 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 DCAF6Q58WW2 860 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 SLC45A4Q5BKX6 768 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 DNAJC21Q5F1R6 531 aaKnown RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 OVOS1Q6IE37 1185 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 BNIPLQ7Z465 357 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 DCP1BQ8IZD4 617 aaKnown RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 NAT8LQ8N9F0 302 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 RNF169Q8NCN4 708 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 BCAS4Q8TDM0 211 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 LPPQ93052 612 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 MYLPFQ96A32 169 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 PCED1BQ96HM7 432 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 FAM193BQ96PV7 902 aaPredicted RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 FAM118BQ9BPY3 351 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 CRTAC1Q9NQ79 661 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
SPARC-209ENST00000539687 FZD10Q9ULW2 581 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 TRIP11Q15643 1979 aa10.56□□□□□ -0.72
SPARC-209ENST00000539687 PDE4DIPQ5VU43 2346 aa10.55□□□□□ -0.72
SPARC-209ENST00000539687 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms