RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TWNKQ96RR1 684 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 LBHD1Q9BQE6 289 aaPredicted RBP10.02□□□□□ -0.8
CDH13-204ENST00000539548 SIKE1Q9BRV8 207 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 THTPAQ9BU02 230 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 FAM192AQ9GZU8 254 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 C2orf40Q9H1Z8 148 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 ZNF395Q9H8N7 513 aaPredicted RBP10.02□□□□□ -0.8
CDH13-204ENST00000539548 UGT1A7Q9HAW7 530 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 UGT1A10Q9HAW8 530 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 UGT1A8Q9HAW9 530 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 PIDD1Q9HB75 910 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 SIX4Q9UIU6 781 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 ZNF112Q9UJU3 913 aa10.02□□□□□ -0.8
CDH13-204ENST00000539548 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.8
CDH13-204ENST00000539548 HMX2A2RU54 273 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 DCAF8L1A6NGE4 600 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 ACKR2O00590 384 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 APOL1O14791 398 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 GAS2O43903 313 aaKnown RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 FKBP6O75344 327 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 ZBED1O96006 694 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 KRT19P08727 400 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 VDRP11473 427 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 PDGFRAP16234 1089 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 PTPRAP18433 802 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 RBL1P28749 1068 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 CRABP2P29373 138 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 GCLCP48506 637 aaPredicted RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 HMGCS2P54868 508 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 SARNPP82979 210 aaKnown RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 KDSRQ06136 332 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 ORC1Q13415 861 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 AAGABQ6PD74 315 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 RFX8Q6ZV50 586 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 NDUFAF2Q8N183 169 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 PQLC3Q8N755 202 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 RNF149Q8NC42 400 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 STKLD1Q8NE28 680 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 FAM167AQ96KS9 214 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 EBNA1BP2Q99848 306 aaKnown RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 CCDC28BQ9BUN5 200 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 C20orf27Q9GZN8 174 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 ASCC2Q9H1I8 757 aaPredicted RBP10.02□□□□□ -0.81
CDH13-204ENST00000539548 CYP3A43Q9HB55 503 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 THAP1Q9NVV9 213 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 SLC7A8Q9UHI5 535 aa10.02□□□□□ -0.81
CDH13-204ENST00000539548 IGKV6-21A0A0C4DH24 114 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 M0QYV0 167 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 SNUPNO95149 360 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 CSH1P0DML2 217 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CSH2P0DML3 217 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 AOC1P19801 751 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CPOXP36551 454 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 BCAR1P56945 870 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 BMPR2Q13873 1038 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 KRT81Q14533 505 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 RBBP5Q15291 538 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 RAB6CQ53S08 254 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 NBPF12Q5TAG4 269 aaPredicted RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 FOXB2Q5VYV0 432 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 DCAF15Q66K64 600 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 SLC9A4Q6AI14 798 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CYS1Q717R9 158 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 GSDMBQ8TAX9 411 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 SEPT1Q8WYJ6 367 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CLPTM1LQ96KA5 538 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 RILPQ96NA2 401 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 ECSITQ9BQ95 431 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 MIS12Q9H081 205 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 RAB6CQ9H0N0 254 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 FZD8Q9H461 694 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 SMYD3Q9H7B4 428 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 NDE1Q9NXR1 346 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 HOXC10Q9NYD6 342 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 HMGXB4Q9UGU5 601 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 A0A088AWK7 358 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CCDC195A0A1B0GUA6 201 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 PRR5-ARHGAP8B1AHC4 643 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 GCATO75600 419 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 APRTP07741 180 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 LYNP07948 512 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 KITP10721 976 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 TPSB2P20231 275 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 CNTFP26441 200 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 ATICP31939 592 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 TCF7P36402 384 aaPredicted RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 ALDH18A1P54886 795 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 OSTNP61366 133 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 ARHGAP8P85298 464 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 DSG1Q02413 1049 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 HNRNPDQ14103 355 aaKnown RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 TPSAB1Q15661 275 aa10.01□□□□□ -0.81
CDH13-204ENST00000539548 C15orf59Q2T9L4 293 aaPredicted RBP10.01□□□□□ -0.81
CDH13-204ENST00000539548 MDH1BQ5I0G3 518 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms