RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 LRRC3Q9BY71 257 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 SMOC2Q9H3U7 446 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 SNX12Q9UMY4 172 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 MYO9BQ13459 2157 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 TMEM265A0A087WTH1 108 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF840PA6NDX5 716 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 M0QYT0 321 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ENDOD1O94919 500 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 IGLV3-25P01717 112 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 DESP17661 470 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 CTNNA2P26232 953 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 IL1R2P27930 398 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ATXN1P54253 815 aaKnown RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 AMPD2Q01433 879 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 MSANTD2Q6P1R3 559 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 CYP4V2Q6ZWL3 525 aaPredicted RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 TAC4Q86UU9 113 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ALG3Q92685 438 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 PEBP4Q96S96 227 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 PSMB7Q99436 277 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 CDCA3Q99618 268 aaPredicted RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 UXTQ9UBK9 157 aaPredicted RBP11.92□□□□□ -0.5
FAM60A-206ENST00000539409 DPP7Q9UHL4 492 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 NUDT5Q9UKK9 219 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
FAM60A-206ENST00000539409 ANAPC1Q9H1A4 1944 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 SOX1O00570 391 aaPredicted RBP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 PSTPIP1O43586 416 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 TRUB2O95900 331 aaKnown RBP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 HNRNPA1P09651 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 RARGP13631 454 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 RDXP35241 583 aaKnown RBP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 SSR1P43307 286 aaKnown RBP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 PEX5P50542 639 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 RHOT1Q8IXI2 618 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 ELMOD1Q8N336 334 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 CASP10Q92851 521 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 PRDM12Q9H4Q4 367 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 CCSER2Q9H7U1 834 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 FAM204AQ9H8W3 233 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 PIGVQ9NUD9 493 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 DDIT4Q9NX09 232 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 USP18Q9UMW8 372 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 TLR5O60602 858 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 F11P03951 625 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 NME3Q13232 169 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 LRRC38Q5VT99 294 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 DCAF12L1Q5VU92 463 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
FAM60A-206ENST00000539409 POLNQ7Z5Q5 900 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 HS6ST3Q8IZP7 471 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 HCFC1R1Q9NWW0 138 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 TRPM5Q9NZQ8 1165 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 PCSK1NQ9UHG2 260 aa11.91□□□□□ -0.5
FAM60A-206ENST00000539409 SYNJ2BP-COX16A0A087WUM0 186 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 TBX18O95935 607 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 POU2F2P09086 479 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 RALAP11233 206 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 CXCR5P32302 372 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 GJC1P36383 396 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 PPP3CCP48454 512 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 HYAL1Q12794 435 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 EIF4EBP2Q13542 120 aaPredicted RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 GRIN2CQ14957 1233 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF697Q5TEC3 545 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ELMSAN1Q6PJG2 1045 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 FAM131BQ86XD5 332 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 UBL4BQ8N7F7 174 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 ZNF707Q96C28 371 aaPredicted RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 NCAPGQ9BPX3 1015 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 CORO1BQ9BR76 489 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 WDR6Q9NNW5 1121 aaKnown RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 COX16Q9P0S2 106 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 SFMBT1Q9UHJ3 866 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 SAR1BQ9Y6B6 198 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 DENND4CQ5VZ89 1909 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 NRG2O14511 850 aaPredicted RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 KCNK3O14649 394 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 MDM4O15151 490 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 IRAK2O43187 625 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 MSI1O43347 362 aaKnown RBP11.9□□□□□ -0.5
FAM60A-206ENST00000539409 PRPSAP2O60256 369 aa11.9□□□□□ -0.5
FAM60A-206ENST00000539409 SRGAP2O75044 1071 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms