RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 MID2Q9UJV3 735 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 FZD4Q9ULV1 537 aa6.15□□□□□ -1.42
CCDC7-209ENST00000539197 NOP58Q9Y2X3 529 aaKnown RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 SIRT4Q9Y6E7 314 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-209ENST00000539197 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 CFAP69A5D8W1 941 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 A6NNZ2 444 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 TXNL4AP83876 142 aaKnown RBP6.14□□□□□ -1.43
CCDC7-209ENST00000539197 UBAP2Q5T6F2 1119 aaKnown RBP6.14□□□□□ -1.43
CCDC7-209ENST00000539197 CLEC9AQ6UXN8 241 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 TFAP2DQ7Z6R9 452 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 KIAA0319LQ8IZA0 1049 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 SMCR8Q8TEV9 937 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-209ENST00000539197 BRINP2Q9C0B6 783 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 CDH19Q9H159 772 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 MLXIPQ9HAP2 919 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 SEMA4BQ9NPR2 832 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-209ENST00000539197 COL20A1Q9P218 1284 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 STEAP1Q9UHE8 339 aa6.14□□□□□ -1.43
CCDC7-209ENST00000539197 TTBK1Q5TCY1 1321 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-209ENST00000539197 C2CD4BA6NLJ0 364 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 PRPF3O43395 683 aaKnown RBP6.13□□□□□ -1.43
CCDC7-209ENST00000539197 MBPP02686 304 aaPredicted RBP6.13□□□□□ -1.43
CCDC7-209ENST00000539197 B4GALNT1Q00973 533 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 EARS2Q5JPH6 523 aaKnown RBP6.13□□□□□ -1.43
CCDC7-209ENST00000539197 MANEAQ5SRI9 462 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 GRHL2Q6ISB3 625 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 DLK2Q6UY11 383 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 RAVER1Q8IY67 606 aaKnown RBP6.13□□□□□ -1.43
CCDC7-209ENST00000539197 FAM71DQ8N9W8 422 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 RUNDC1Q96C34 613 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 NMD3Q96D46 503 aaKnown RBP6.13□□□□□ -1.43
CCDC7-209ENST00000539197 TRMT61AQ96FX7 289 aaKnown RBP6.13□□□□□ -1.43
CCDC7-209ENST00000539197 NLRP4Q96MN2 994 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 NUAK2Q9H093 628 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 TMEM60Q9H2L4 133 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 TMEM45AQ9NWC5 275 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 ZIM2Q9NZV7 527 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 SLC27A6Q9Y2P4 619 aa6.13□□□□□ -1.43
CCDC7-209ENST00000539197 AQP7P3A6NL99 342 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 PDGFRBP09619 1106 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 IBSPP21815 317 aaPredicted RBP6.12□□□□□ -1.43
CCDC7-209ENST00000539197 ACVR2AP27037 513 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 GALNSP34059 522 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 CPT1AP50416 773 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 SLC29A2Q14542 456 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 CNGA2Q16280 664 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 HIST1H2AAQ96QV6 131 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 VPS33BQ9H267 617 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 CHST8Q9H2A9 424 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 AGO4Q9HCK5 861 aaKnown RBP6.12□□□□□ -1.43
CCDC7-209ENST00000539197 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 ARL8BQ9NVJ2 186 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 DKK4Q9UBT3 224 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 AFF4Q9UHB7 1163 aaKnown RBP6.12□□□□□ -1.43
CCDC7-209ENST00000539197 VPS51Q9UID3 782 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 NOB1Q9ULX3 412 aaKnown RBP6.12□□□□□ -1.43
CCDC7-209ENST00000539197 L1RE1Q9UN81 338 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 PROCRQ9UNN8 238 aa6.12□□□□□ -1.43
CCDC7-209ENST00000539197 ISM1B1AKI9 464 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 SNX2O60749 519 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 PLAUP00749 431 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 TXNP10599 105 aaKnown RBP6.11□□□□□ -1.43
CCDC7-209ENST00000539197 TPH1P17752 444 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 IL6STP40189 918 aaPredicted RBP6.11□□□□□ -1.43
CCDC7-209ENST00000539197 FMO1Q01740 532 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 FHL3Q13643 280 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 SESTD1Q86VW0 696 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 ASB5Q8WWX0 329 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 FAM83DQ9H4H8 585 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 SAP30LQ9HAJ7 183 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 DDX56Q9NY93 547 aaKnown RBP6.11□□□□□ -1.43
CCDC7-209ENST00000539197 TPCN1Q9ULQ1 816 aa6.11□□□□□ -1.43
CCDC7-209ENST00000539197 SPATA31A1Q5TZJ5 1347 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 SLC22A23A1A5C7 686 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 USP12O75317 370 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 RFPL1O75677 317 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 HTR7P34969 479 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 EIF4A1P60842 406 aaKnown RBP6.1□□□□□ -1.43
CCDC7-209ENST00000539197 PLAG1Q6DJT9 500 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 ADHFE1Q8IWW8 467 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 BCAS4Q8TDM0 211 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 SLC25A28Q96A46 364 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 FCRL5Q96RD9 977 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 CTAGE1Q96RT6 745 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 CINPQ9BW66 212 aaPredicted RBP6.1□□□□□ -1.43
CCDC7-209ENST00000539197 ZCWPW1Q9H0M4 648 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 TMEM8AQ9HCN3 771 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 SEMA5BQ9P283 1151 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 ITGB1BP2Q9UKP3 347 aa6.1□□□□□ -1.43
CCDC7-209ENST00000539197 A0A1W2PPC1 479 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 PRSS44E7EML9 344 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 FOXN3O00409 490 aaPredicted RBP6.09□□□□□ -1.43
CCDC7-209ENST00000539197 SYF2O95926 243 aaKnown RBP6.09□□□□□ -1.43
CCDC7-209ENST00000539197 BTF3P20290 206 aaKnown RBP6.09□□□□□ -1.43
CCDC7-209ENST00000539197 JAK3P52333 1124 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 CCDC15Q0P6D6 951 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 ODF3L2Q3SX64 289 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 MANEALQ5VSG8 457 aa6.09□□□□□ -1.43
CCDC7-209ENST00000539197 FAM57BQ71RH2 274 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms