RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ITGB3P05106 788 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ATP5BP06576 529 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 AOC1P19801 751 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 BGNP21810 368 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PAX7P23759 505 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 HOXA11P31270 313 aaPredicted RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 DYNLT1P63172 113 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ROR1Q01973 937 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 DALRD3Q5D0E6 543 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ARHGAP17Q68EM7 881 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ZNF449Q6P9G9 518 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 NT5DC4Q86YG4 428 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PDIK1LQ8N165 341 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 TMEM151AQ8N4L1 468 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PHC3Q8NDX5 983 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ANKRD36BP1Q96IX9 119 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 QKIQ96PU8 341 aaKnown RBP eCLIP7.2□□□□□ -1.26
PROM1-219ENST00000539194 SORT1Q99523 831 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 TRIM56Q9BRZ2 755 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 MAGEB5Q9BZ81 275 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ASNSD1Q9NWL6 643 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PAK5Q9P286 719 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 KIAA1257Q9ULG3 409 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 COL1A2P08123 1366 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 SF3B1O75533 1304 aaKnown RBP eCLIP7.2□□□□□ -1.26
PROM1-219ENST00000539194 TSPAN1O60635 241 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 LPXNO60711 386 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 APOEP02649 317 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 FGF3P11487 239 aaPredicted RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 VAV1P15498 845 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ARF4P18085 180 aaPredicted RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 RBL1P28749 1068 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ATP11AP98196 1134 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 TFAMQ00059 246 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 NCBP2-AS2Q69YL0 99 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PGM2L1Q6PCE3 622 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 TRMT10BQ6PF06 316 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 MARK2Q7KZI7 788 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 KCTD6Q8NC69 237 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 SHKBP1Q8TBC3 707 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 KBTBD7Q8WVZ9 684 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 AZIN2Q96A70 460 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 NSL1Q96IY1 281 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ZMAT2Q96NC0 199 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 FAM111AQ96PZ2 611 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 NMRK1Q9NWW6 199 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 DNAJB4Q9UDY4 337 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PCDHA11Q9Y5I1 949 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 IQANK1A0A1B0GTG1 560 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 FAM237BA0A1B0GVD1 139 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 GOLGA8RI6L899 631 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 SRGAP2CP0DJJ0 459 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 ADORA2AP29274 412 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 NDST1P52848 882 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 HNRNPDQ14103 355 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 SETDB1Q15047 1291 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PPP1R26Q5T8A7 1209 aaPredicted RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 KYAT3Q6YP21 454 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 ALYREFQ86V81 257 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 KLF6Q99612 283 aaPredicted RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 EBNA1BP2Q99848 306 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 SYT15Q9BQS2 421 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 MECRQ9BV79 373 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 EIF2B3Q9NR50 452 aaKnown RBP7.2□□□□□ -1.26
PROM1-219ENST00000539194 TSPAN16Q9UKR8 245 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 CEP83Q9Y592 693 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 PLXNA3P51805 1871 aa7.2□□□□□ -1.26
PROM1-219ENST00000539194 BRCA2P51587 3418 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 GBF1Q92538 1859 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 CFAP69A5D8W1 941 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 DCAF8L1A6NGE4 600 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 ADCY6O43306 1168 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 IFNB1P01574 187 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 BPGMP07738 259 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 RASSF2P50749 326 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 LACTBP83111 547 aaPredicted RBP7.19□□□□□ -1.26
PROM1-219ENST00000539194 BST1Q10588 318 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 C11orf91Q3C1V1 193 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 ZNF667Q5HYK9 610 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 EFCAB12Q6NXP0 572 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 C4orf22Q6V702 233 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 CAPN12Q6ZSI9 719 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 ADGRG6Q86SQ4 1221 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 GPATCH11Q8N954 259 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 C12orf29Q8N999 325 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 GIMAP7Q8NHV1 300 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 STON2Q8WXE9 905 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 MTBPQ96DY7 904 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 RSRC1Q96IZ7 334 aaKnown RBP7.19□□□□□ -1.26
PROM1-219ENST00000539194 TUBB6Q9BUF5 446 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 ADAMTS10Q9H324 1103 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 NRDE2Q9H7Z3 1164 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 PRMT7Q9NVM4 692 aaPredicted RBP7.19□□□□□ -1.26
PROM1-219ENST00000539194 PCSK1NQ9UHG2 260 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 DERAQ9Y315 318 aa7.19□□□□□ -1.26
PROM1-219ENST00000539194 A0A088AWK7 358 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms