RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ITGADQ13349 1161 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CCDC36Q8IYA8 594 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 ATG16L2Q8NAA4 619 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 GPR101Q96P66 508 aaPredicted RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 ISCA1Q9BUE6 129 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CHID1Q9BWS9 393 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CCNB1IP1Q9NPC3 277 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 DYRK4Q9NR20 520 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 PRPF19Q9UMS4 504 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 METP08581 1390 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 A0A087X0T9 212 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 C2orf81A6NN90 581 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 TULP2O00295 520 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SKAP2O75563 359 aaPredicted RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 CTDNEP1O95476 244 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 FAM228BP0C875 321 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 AKAP5P24588 427 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CHI3L1P36222 383 aaPredicted RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 BNIP2Q12982 314 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 NEK10Q6ZWH5 1172 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 OTOAQ7RTW8 1153 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 MIER2Q8N344 545 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 SLC7A14Q8TBB6 771 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 FBXO25Q8TCJ0 367 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 CAPSLQ8WWF8 208 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 MYDGFQ969H8 173 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 FAM120BQ96EK7 910 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 MRPL39Q9NYK5 338 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 CCDC59Q9P031 241 aaKnown RBP7.12□□□□□ -1.27
SORT1-209ENST00000538502 ACOT9Q9Y305 439 aa7.12□□□□□ -1.27
SORT1-209ENST00000538502 HACD1B0YJ81 288 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 CYBBP04839 570 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 CYP2C9P11712 490 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ANPEPP15144 967 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 MYL12AP19105 171 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 PPP3CCP48454 512 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 NR2C2P49116 596 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 CCT3P49368 545 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 ZNF543Q08ER8 600 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 MEA1Q16626 185 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 RUNDC3AQ59EK9 446 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 FASTKD5Q7L8L6 764 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 AKAP14Q86UN6 197 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 OR7A2PQ8NGA2 310 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 AP3S1Q92572 193 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 SLITRK2Q9H156 845 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 SMARCAD1Q9H4L7 1026 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 TBC1D13Q9NVG8 400 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.11□□□□□ -1.27
SORT1-209ENST00000538502 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 BIRC5O15392 142 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ADCY6O43306 1168 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 SUPT7LO94864 414 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 C1QBPQ07021 282 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 FASTKQ14296 549 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 FRG1Q14331 258 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 CLEC16AQ2KHT3 1053 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 CCDC157Q569K6 752 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 CASP12Q6UXS9 341 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ARCQ7LC44 396 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 GRIP2Q9C0E4 1043 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 RMI1Q9H9A7 625 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.11□□□□□ -1.27
SORT1-209ENST00000538502 CCDC154A6NI56 674 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 FDPSP14324 419 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 NPY2RP49146 381 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 VEPH1Q14D04 833 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ACAP1Q15027 740 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 QPRTQ15274 297 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 AGKQ53H12 422 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 SUSD4Q5VX71 490 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 TWF2Q6IBS0 349 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 ZNF605Q86T29 641 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ZDHHC13Q8IUH4 622 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 WDR36Q8NI36 951 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 ARMC7Q9H6L4 198 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ADAM28Q9UKQ2 775 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 PCDHA3Q9Y5H8 950 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ABCC3O15438 1527 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 SAGE2PA6NJ88 616 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ASB14A6NK59 587 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 MTRF1O75570 445 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 VIL1P09327 827 aaKnown RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 CCDC166P0CW27 439 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 VAC14Q08AM6 782 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ST3GAL1Q11201 340 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 GOLGA7BQ2TAP0 167 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 TTMPQ5BVD1 217 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 DPY19L2Q6NUT2 758 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 DPP10Q8N608 796 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 LBHD1Q9BQE6 289 aaPredicted RBP7.11□□□□□ -1.27
SORT1-209ENST00000538502 CYLDQ9NQC7 956 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 KBTBD4Q9NVX7 518 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ADPRHL2Q9NX46 363 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 ING3Q9NXR8 418 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 CLTCL1P53675 1640 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 MYL12BO14950 172 aa7.11□□□□□ -1.27
SORT1-209ENST00000538502 NMT2O60551 498 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms