RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SLC10A2Q12908 348 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 EFTUD2Q15029 972 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■■■□ 23.5
SLC28A1-204ENST00000538177 SLC45A4Q5BKX6 768 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 PAQR9Q6ZVX9 377 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 SPATA21Q7Z572 469 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 PSTKQ8IV42 348 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 C4orf33Q8N1A6 199 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 GRAMD1AQ96CP6 724 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 MRRFQ96E11 262 aaKnown RBP11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 CSPG4P5Q96PW8 444 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 KCTD15Q96SI1 283 aaPredicted RBP11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 CYTH2Q99418 400 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 PLCD4Q9BRC7 762 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 PNPLA8Q9NP80 782 aa11.86□□□□□ -0.51
SLC28A1-204ENST00000538177 CYB561D2O14569 222 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 ATP2C2O75185 946 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 DUSP11O75319 330 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 GCATO75600 419 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 AKR1A1P14550 325 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 PTPN1P18031 435 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 RPA3P35244 121 aaPredicted RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 SF3A3Q12874 501 aaKnown RBP eCLIP11.85□□□□□ -0.513e-8■■■■■ 54.4
SLC28A1-204ENST00000538177 MTFR1Q15390 333 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 CCDC185Q8N715 623 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 MCUQ8NE86 351 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 KCTD13Q8WZ19 329 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 NT5C3BQ969T7 300 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 MAGEB5Q9BZ81 275 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 PRDM16Q9HAZ2 1276 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 ETNK2Q9NVF9 386 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 RCOR3Q9P2K3 495 aaPredicted RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 ARL2BPQ9Y2Y0 163 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 DAB1O75553 588 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 NPR3P17342 541 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 KRT4P19013 534 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 CA4P22748 312 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC8A3P57103 927 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 YWHAZP63104 245 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 GBE1Q04446 702 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 MTM1Q13496 603 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 PDK4Q16654 411 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 FBXW10Q5XX13 1052 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 WSCD1Q658N2 575 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 BNIPLQ7Z465 357 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 CAND1Q86VP6 1230 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 DEFB106AQ8N104 65 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 AGGF1Q8N302 714 aaeCLIP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 ALKBH8Q96BT7 664 aaKnown RBP11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 ZFP42Q96MM3 310 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 ETNK1Q9HBU6 452 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC12A4Q9UP95 1085 aa11.85□□□□□ -0.51
SLC28A1-204ENST00000538177 MYADML2A6NDP7 307 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 KBTBD13C9JR72 458 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 DNAJC8O75937 253 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 ZWINTO95229 277 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 MAP3K6O95382 1288 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 MRPS5P82675 430 aaKnown RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 ADIGQ0VDE8 80 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC1A5Q15758 541 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 ZKSCAN8Q15776 578 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 GSTCDQ8NEC7 633 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 TRPV1Q8NER1 839 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 CCDC110Q8TBZ0 833 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC44A1Q8WWI5 657 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 LRRC39Q96DD0 335 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 QKIQ96PU8 341 aaKnown RBP eCLIP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 MTG1Q9BT17 334 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 ABCF3Q9NUQ8 709 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 GRID1Q9ULK0 1009 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 CLDN5O00501 218 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 TNPO2O14787 897 aaKnown RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 AVILO75366 819 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 RASSF9O75901 435 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 DGKIO75912 1065 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 PIAS1O75925 651 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 C1QAP02745 245 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 IGFBP6P24592 240 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 NOS2P35228 1153 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 MAGEA3P43357 314 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 GJA9P57773 515 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 INHBEP58166 350 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 GALNTL6Q49A17 601 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 OTUD1Q5VV17 481 aaPredicted RBP11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 KIAA0319Q5VV43 1072 aa11.84□□□□□ -0.51
SLC28A1-204ENST00000538177 NCBP2-AS2Q69YL0 99 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms