RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 GSTCDQ8NEC7 633 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 HERVK_113Q902F9 699 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 GDF15Q99988 308 aa7.54□□□□□ -1.2
MSH6-209ENST00000538136 TRMT61BQ9BVS5 477 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 SARS2Q9NP81 518 aaKnown RBP7.54□□□□□ -1.2
MSH6-209ENST00000538136 TTC24A2A3L6 582 aaPredicted RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 OR6C75A6NL08 312 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 WASH3PC4AMC7 463 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 AMPD1P23109 780 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ADAM17P78536 824 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CCDC6Q16204 474 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 UAP1L1Q3KQV9 507 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 LRRC8AQ8IWT6 810 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CMTR2Q8IYT2 770 aaKnown RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 TMEM86AQ8N2M4 240 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 LRRC52Q8N7C0 313 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 SLC4A11Q8NBS3 891 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 UBE2ZQ9H832 354 aaPredicted RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 ASNSD1Q9NWL6 643 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 XPO7Q9UIA9 1087 aaKnown RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 PPP2R2CQ9Y2T4 447 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 MYH11P35749 1972 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ZMYM2Q9UBW7 1377 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ESPNB1AK53 854 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ZBTB22O15209 634 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ATP9BO43861 1147 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 EPHX1P07099 455 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CTSAP10619 480 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CENPCQ03188 943 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 GPNMBQ14956 572 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 NR1I3Q14994 352 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 PTPN20Q4JDL3 420 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 EMC10Q5UCC4 262 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 MARK2Q7KZI7 788 aaKnown RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 PYROXD2Q8N2H3 581 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CRISPLD1Q9H336 500 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 FBXO44Q9H4M3 255 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.53□□□□□ -1.2
MSH6-209ENST00000538136 PCDHB8Q9UN66 801 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CEP295Q9C0D2 2601 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CTAGE9A4FU28 777 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 USP27XA6NNY8 438 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ARHGAP6O43182 974 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CALB1P05937 261 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ACADMP11310 421 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 ATF2P15336 505 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 MAPK8IP2Q13387 824 aaPredicted RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 TRIM14Q14142 442 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 LY6G5CQ5SRR4 150 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 AADACL2Q6P093 401 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 RAD9BQ6WBX8 426 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CTAGE3PQ8IX95 158 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 SIX5Q8N196 739 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 KIF18AQ8NI77 898 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 LNX1Q8TBB1 728 aaPredicted RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 ATG4AQ8WYN0 398 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 DEC1Q9P2X7 70 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 AFF4Q9UHB7 1163 aaKnown RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 CD207Q9UJ71 328 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 RWDD3Q9Y3V2 267 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
MSH6-209ENST00000538136 ZNF831Q5JPB2 1677 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 CHD7Q9P2D1 2997 aa7.53□□□□□ -1.2
MSH6-209ENST00000538136 TRBV23OR9-2A0A075B6M9 112 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 GOLGA6L10A0A0M3HER8 536 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 A0A1B0GTH6 734 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 EEF2KO00418 725 aaKnown RBP7.52□□□□□ -1.2
MSH6-209ENST00000538136 PRKCGP05129 697 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 RHOCP08134 193 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 CDR2Q01850 454 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 GHRHRQ02643 423 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 MGAT3Q09327 533 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 MIIPQ5JXC2 388 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 NUDT18Q6ZVK8 323 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 ZNF710Q8N1W2 664 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 EPS8L1Q8TE68 723 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 ARHGEF26Q96DR7 871 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 UROC1Q96N76 676 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 ATP13A1Q9HD20 1204 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 ARFGAP3Q9NP61 516 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 CNTN3Q9P232 1028 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 ARHGAP20Q9P2F6 1191 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 SHOC2Q9UQ13 582 aa7.52□□□□□ -1.2
MSH6-209ENST00000538136 FARP1Q9Y4F1 1045 aaPredicted RBP7.52□□□□□ -1.2
MSH6-209ENST00000538136 ACACBO00763 2458 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 ZNF197O14709 1029 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 USP12O75317 370 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 GPD1P21695 349 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 COG7P83436 770 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 MMRN1Q13201 1228 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 EFHC1Q5JVL4 640 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 EPM2AIP1Q7L775 607 aaPredicted RBP7.52□□□□□ -1.21
MSH6-209ENST00000538136 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
MSH6-209ENST00000538136 ANKRD52Q8NB46 1076 aa7.52□□□□□ -1.21
MSH6-209ENST00000538136 CASP10Q92851 521 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms