RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 USP24Q9UPU5 2620 aa5.79□□□□□ -1.48
SNHG1-207ENST00000537965 COL4A3Q01955 1670 aa5.79□□□□□ -1.48
SNHG1-207ENST00000537965 MYBPHLA2RUH7 354 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 OR6C75A6NL08 312 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 CCDC169A6NNP5 214 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 HEPACAM2A8MVW5 462 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 WASH4PA8MWX3 477 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 BTBD18B2RXH4 712 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 I3L4J1 428 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 MED24O75448 989 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 AKAP3O75969 853 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 OR52Z1P0C646 297 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ZNF806P0C7X5 589 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 MCF2P10911 925 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 VAMP1P23763 118 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 TPP2P29144 1249 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 MCM7P33993 719 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 CCT6AP40227 531 aaKnown RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ATRXP46100 2492 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 BRCC3P46736 316 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 FNTBP49356 437 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ANAPC15P60006 121 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 SHC2P98077 582 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 YWHAHQ04917 246 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 FCHO2Q0JRZ9 810 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 TWF1Q12792 350 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 STRN3Q13033 797 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 PDIA5Q14554 519 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 LPAL2Q16609 132 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 KYAT1Q16773 422 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ZNF568Q3ZCX4 644 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 AASDHQ4L235 1098 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 SEZ6Q53EL9 994 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ARSHQ5FYA8 562 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 EARS2Q5JPH6 523 aaKnown RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 NT5DC1Q5TFE4 455 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 CDCP2Q5VXM1 449 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 CD300LGQ6UXG3 332 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 CACNA2D4Q7Z3S7 1137 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 USP37Q86T82 979 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ITIH5Q86UX2 942 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 WDR5BQ86VZ2 330 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 DIS3L2Q8IYB7 885 aaKnown RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 TCEAL4Q96EI5 215 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 CCDC120Q96HB5 630 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 EAF1Q96JC9 268 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-207ENST00000537965 DRC1Q96MC2 740 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 ALPK1Q96QP1 1244 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 SPON2Q9BUD6 331 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 TIPINQ9BVW5 301 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 PLEKHA5Q9HAU0 1116 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 KMT5AQ9NQR1 393 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 GJB4Q9NTQ9 266 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 C19orf73Q9NVV2 129 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 GPATCH2Q9NW75 528 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 BAHCC1Q9P281 2608 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 HSFX1Q9UBD0 423 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 DNM3Q9UQ16 869 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 PCDHGA5Q9Y5G8 931 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 PTPRDP23468 1912 aa5.78□□□□□ -1.48
SNHG1-207ENST00000537965 GOLGA4Q13439 2230 aaKnown RBP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 A0A087WWV3 80 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 SHISA7A6NL88 538 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 SPECC1L-ADORA2AF8WAN1 911 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 H0YCG3 227 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 M0QZQ0 153 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 UBOX5O94941 541 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 OAZ2O95190 189 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 SEC24AO95486 1093 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 CYP3A5P20815 502 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 SCP2P22307 547 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 GBP1P32455 592 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 GDNFP39905 211 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 VIPR2P41587 438 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 CCR2P41597 374 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 MATR3P43243 847 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 AFMP43652 599 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 TRAPPC10P48553 1259 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 TUFMP49411 452 aaKnown RBP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 ZNF165P49910 485 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 PEX3P56589 373 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 OSTNP61366 133 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 SATB1Q01826 763 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 CLCQ05315 142 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 SMARCB1Q12824 385 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 GRSF1Q12849 480 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 GPR17Q13304 367 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 GNL2Q13823 731 aaKnown RBP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 MYBPC2Q14324 1141 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 VEPH1Q14D04 833 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 TEAD2Q15562 447 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 TAF12Q16514 161 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 ITPRIPL2Q3MIP1 535 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 HEATR6Q6AI08 1181 aaKnown RBP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 ARMCX5Q6P1M9 558 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 MPZL3Q6UWV2 235 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 TSPYL5Q86VY4 417 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 ZSWIM9Q86XI8 627 aa5.77□□□□□ -1.49
SNHG1-207ENST00000537965 ARID3BQ8IVW6 561 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-207ENST00000537965 CAMKK1Q8N5S9 505 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms