RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LGALS2P05162 132 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 CSH1P0DML2 217 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 CSH2P0DML3 217 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 HDAC4P56524 1084 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 KYAT1Q16773 422 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 PKDCCQ504Y2 493 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 DSTYKQ6XUX3 929 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 TTC39CQ8N584 583 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 ARMC2Q8NEN0 867 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 OXNAD1Q96HP4 312 aaPredicted RBP14.85□□□□□ -0.03
USP44-203ENST00000537435 MRPL45Q9BRJ2 306 aaKnown RBP14.85□□□□□ -0.03
USP44-203ENST00000537435 ZNF670Q9BS34 389 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 DONSONQ9NYP3 566 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 LRRC42Q9Y546 428 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 ADM5C9JUS6 153 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 PAPSS1O43252 624 aaPredicted RBP14.85□□□□□ -0.03
USP44-203ENST00000537435 RFPL1O75677 317 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 METTL18O95568 372 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 TFE3P19532 575 aaPredicted RBP14.85□□□□□ -0.03
USP44-203ENST00000537435 CYP2F1P24903 491 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 KHDC1Q4VXA5 237 aaKnown RBP14.85□□□□□ -0.03
USP44-203ENST00000537435 RINLQ6ZS11 566 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 MCUQ8NE86 351 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 NLRP7Q8WX94 980 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 LRRC39Q96DD0 335 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 CLMNQ96JQ2 1002 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 SLC4A5Q9BY07 1137 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 B3GNT5Q9BYG0 378 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 NRDE2Q9H7Z3 1164 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 DCLRE1BQ9H816 532 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 MAD1L1Q9Y6D9 718 aa14.85□□□□□ -0.03
USP44-203ENST00000537435 I3L4J1 428 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 FCHO1O14526 889 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 TSPAN1O60635 241 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 LMNAP02545 664 aaKnown RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 ESRRAP11474 423 aaPredicted RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 CCNFP41002 786 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 PTDSS1P48651 473 aaKnown RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 TMPRSS15P98073 1019 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 GBE1Q04446 702 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 ARHGAP1Q07960 439 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 BST1Q10588 318 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 KRT72Q14CN4 511 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 TRMT10BQ6PF06 316 aaKnown RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 ZNF534Q76KX8 674 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 TMEM110Q86TL2 294 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 ALYREFQ86V81 257 aaKnown RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 CDKL3Q8IVW4 592 aaPredicted RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 GPC2Q8N158 579 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 VPS52Q8N1B4 723 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 CCDC33Q8N5R6 958 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 NMUR2Q9GZQ4 415 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 FAM124BQ9H5Z6 455 aaPredicted RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 SNX9Q9Y5X1 595 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 GABBR2O75899 941 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 DESP17661 470 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 ATXN1P54253 815 aaKnown RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 SLC10A2Q12908 348 aaPredicted RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 TRIM68Q6AZZ1 485 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 APBB1IPQ7Z5R6 666 aaPredicted RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 SESTD1Q86VW0 696 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 TRIM42Q8IWZ5 723 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP44-203ENST00000537435 MPP5Q8N3R9 675 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP44-203ENST00000537435 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 MCUR1Q96AQ8 359 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 E2F7Q96AV8 911 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 SIGLEC10Q96LC7 697 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 CXCL16Q9H2A7 254 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 PCMTD2Q9NV79 361 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 TAS2R1Q9NYW7 299 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 ARMCX1Q9P291 453 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 NME7Q9Y5B8 376 aa14.84□□□□□ -0.03
USP44-203ENST00000537435 POLR2AP24928 1970 aaKnown RBP14.84□□□□□ -0.03
USP44-203ENST00000537435 CCDC195A0A1B0GUA6 201 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 CYB561D2O14569 222 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 PPEF2O14830 753 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 KIF1CO43896 1103 aaKnown RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 KRT38O76015 456 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 LUC7L3O95232 432 aaKnown RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 GSTA2P09210 222 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 ABL2P42684 1182 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 MAGEA3P43357 314 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 CHI3L2Q15782 390 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 GSDMBQ8TAX9 411 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 C7orf26Q96N11 449 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 EBNA1BP2Q99848 306 aaKnown RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 FAM167BQ9BTA0 163 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 MAGEB5Q9BZ81 275 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 DHX35Q9H5Z1 703 aaKnown RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 HESX1Q9UBX0 185 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 MCM3APO60318 1980 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 SETSIPP0DME0 302 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 GRIA1P42261 906 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 HSF5Q4G112 596 aaPredicted RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 MROH9Q5TGP6 573 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 CES4AQ5XG92 561 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 ATG16L1Q676U5 607 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 ERO1BQ86YB8 467 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms