RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ACVR2AP27037 513 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 GALNSP34059 522 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 CPT1AP50416 773 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 SLC29A2Q14542 456 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 CNGA2Q16280 664 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 PFKFB3Q16875 520 aaPredicted RBP6.12□□□□□ -1.43
CCDC7-208ENST00000537047 EARS2Q5JPH6 523 aaKnown RBP6.12□□□□□ -1.43
CCDC7-208ENST00000537047 ZNF793Q6ZN11 406 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 SMRP1Q8NCR6 262 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 HIST1H2AAQ96QV6 131 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 BRINP2Q9C0B6 783 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 CHST8Q9H2A9 424 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 MLXIPQ9HAP2 919 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 AGO4Q9HCK5 861 aaKnown RBP6.12□□□□□ -1.43
CCDC7-208ENST00000537047 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 DKK4Q9UBT3 224 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 AFF4Q9UHB7 1163 aaKnown RBP6.12□□□□□ -1.43
CCDC7-208ENST00000537047 VPS51Q9UID3 782 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 NOB1Q9ULX3 412 aaKnown RBP6.12□□□□□ -1.43
CCDC7-208ENST00000537047 MAFFQ9ULX9 164 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 L1RE1Q9UN81 338 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 PROCRQ9UNN8 238 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 PLAUP00749 431 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 TXNP10599 105 aaKnown RBP6.11□□□□□ -1.43
CCDC7-208ENST00000537047 CDKN2AP42771 156 aaKnown RBP6.11□□□□□ -1.43
CCDC7-208ENST00000537047 HSF1Q00613 529 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 FMO1Q01740 532 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 FHL3Q13643 280 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 TMEM63BQ5T3F8 832 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 SESTD1Q86VW0 696 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 ASB5Q8WWX0 329 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 NUAK2Q9H093 628 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 SAP30LQ9HAJ7 183 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 SEMA4BQ9NPR2 832 aaPredicted RBP6.11□□□□□ -1.43
CCDC7-208ENST00000537047 DDX56Q9NY93 547 aaKnown RBP6.11□□□□□ -1.43
CCDC7-208ENST00000537047 TPCN1Q9ULQ1 816 aa6.11□□□□□ -1.43
CCDC7-208ENST00000537047 E2F8A0AVK6 867 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 SLC22A23A1A5C7 686 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 RFPL1O75677 317 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 TPH1P17752 444 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 HTR7P34969 479 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 EIF4A1P60842 406 aaKnown RBP6.1□□□□□ -1.43
CCDC7-208ENST00000537047 LCE1EQ5T753 118 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 DAB2IPQ5VWQ8 1189 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 PLAG1Q6DJT9 500 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 UBE2Q1Q7Z7E8 422 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 FAM71DQ8N9W8 422 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 SLC25A28Q96A46 364 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 FCRL5Q96RD9 977 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 DHX36Q9H2U1 1008 aaKnown RBP6.1□□□□□ -1.43
CCDC7-208ENST00000537047 TMEM45AQ9NWC5 275 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 SEMA5BQ9P283 1151 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 STEAP1Q9UHE8 339 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 ITGB1BP2Q9UKP3 347 aa6.1□□□□□ -1.43
CCDC7-208ENST00000537047 IGLV5-39A0A0G2JS06 123 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 A0A1W2PPC1 479 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 CD19P15391 556 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 BTF3P20290 206 aaKnown RBP6.09□□□□□ -1.43
CCDC7-208ENST00000537047 IBSPP21815 317 aaPredicted RBP6.09□□□□□ -1.43
CCDC7-208ENST00000537047 TXNL4AP83876 142 aaKnown RBP6.09□□□□□ -1.43
CCDC7-208ENST00000537047 FAM110CQ1W6H9 321 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 ODF3L2Q3SX64 289 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 MANEALQ5VSG8 457 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 ARL8BQ9NVJ2 186 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 DNAJB11Q9UBS4 358 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 COG5Q9UP83 839 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 PAXBP1Q9Y5B6 917 aa6.09□□□□□ -1.43
CCDC7-208ENST00000537047 ISM1B1AKI9 464 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 ZNF814B7Z6K7 855 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 FAM227AF5H4B4 570 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 HOXA7P31268 230 aaPredicted RBP6.08□□□□□ -1.44
CCDC7-208ENST00000537047 COPAP53621 1224 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 RAE1P78406 368 aaKnown RBP6.08□□□□□ -1.44
CCDC7-208ENST00000537047 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 ZNF585BQ52M93 769 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 DLK2Q6UY11 383 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 UNC13DQ70J99 1090 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 NGDNQ8NEJ9 315 aaKnown RBP6.08□□□□□ -1.44
CCDC7-208ENST00000537047 VPS50Q96JG6 964 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 NOTCH4Q99466 2003 aa6.08□□□□□ -1.44
CCDC7-208ENST00000537047 MARCH6O60337 910 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 IDUAP35475 653 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 JAK3P52333 1124 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 WDR5P61964 334 aaKnown RBP6.07□□□□□ -1.44
CCDC7-208ENST00000537047 B4GALNT1Q00973 533 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 CCDC15Q0P6D6 951 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 MPLKIPQ8TAP9 179 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 NLRP4Q96MN2 994 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 TYW1Q9NV66 732 aaKnown RBP6.07□□□□□ -1.44
CCDC7-208ENST00000537047 VPS4AQ9UN37 437 aa6.07□□□□□ -1.44
CCDC7-208ENST00000537047 THRAP3Q9Y2W1 955 aaKnown RBP6.07□□□□□ -1.44
CCDC7-208ENST00000537047 AQP7P3A6NL99 342 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 NDUFB8O95169 186 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 TMIGD3P0DMS9 266 aaPredicted RBP6.06□□□□□ -1.44
CCDC7-208ENST00000537047 TMEM225BP0DP42 221 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 PLA2G2AP14555 144 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 ST6GAL1P15907 406 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 RBL1P28749 1068 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 MTAPQ13126 283 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms