RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 TMEM134Q9H6X4 195 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 SELENONQ9NZV5 590 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 WHRNQ9P202 907 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ZNF148Q9UQR1 794 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ACTL7BQ9Y614 415 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TRMUO75648 421 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 TFAP2AP05549 437 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 WEE2P0C1S8 567 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TTLL4Q14679 1199 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 MYLK3Q32MK0 819 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 TRMT5Q32P41 509 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 EEF1DP3Q658K8 133 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 IYDQ6PHW0 289 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ULK2Q8IYT8 1036 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 GDPD5Q8WTR4 605 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 ERLEC1Q96DZ1 483 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 KLF6Q99612 283 aaPredicted RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 MINDY3Q9H8M7 445 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 LIN28AQ9H9Z2 209 aaKnown RBP14.5□□□□□ -0.09
LIG1-203ENST00000536218 SLC7A8Q9UHI5 535 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 APPL1Q9UKG1 709 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 LZTS1Q9Y250 596 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 WDR90Q96KV7 1748 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 CENPFP49454 3210 aa14.5□□□□□ -0.09
LIG1-203ENST00000536218 DNAJC25-GNG10A0A024R161 153 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 STRNO43815 780 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 PIAS1O75925 651 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 PIGRP01833 764 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 CYP1A2P05177 515 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 KRT19P08727 400 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 GSTT2P0CG29 244 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 GSTT2BP0CG30 244 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 TMED10P49755 219 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 PLCB3Q01970 1234 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 ZNF362Q5T0B9 420 aaPredicted RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 C11orf63Q6NUN7 778 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 NUP93Q8N1F7 819 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 GSTCDQ8NEC7 633 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 KCNN1Q92952 543 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 DHRS1Q96LJ7 313 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 ACO2Q99798 780 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 VPS37BQ9H9H4 285 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 ADGRA2Q96PE1 1338 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 MIF4GDA9UHW6 222 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 XPOTO43592 962 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 ZC3H11AO75152 810 aaKnown RBP eCLIP14.49□□□□□ -0.092e-8■■■■□ 25.1
LIG1-203ENST00000536218 SERPINB6P35237 376 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 EFNA5P52803 228 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 PDE1BQ01064 536 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 MSLNQ13421 630 aaPredicted RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 RASA2Q15283 850 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 SPDYAQ5MJ70 313 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 NET1Q7Z628 596 aaPredicted RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 ALYREFQ86V81 257 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 MCOLN2Q8IZK6 566 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 METTL25Q8N6Q8 603 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 NMUR2Q9GZQ4 415 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 MROH8Q9H579 483 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 CYLDQ9NQC7 956 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 UBAP1Q9NZ09 502 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 NXF1Q9UBU9 619 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 SMG5Q9UPR3 1016 aaKnown RBP14.49□□□□□ -0.09
LIG1-203ENST00000536218 GINS2Q9Y248 185 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 ARID2Q68CP9 1835 aa14.49□□□□□ -0.09
LIG1-203ENST00000536218 F8W8V4 182 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 BUD23O43709 281 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 TRPA1O75762 1119 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 STAMBPO95630 424 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ZNF286BP0CG31 522 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 KRT4P19013 534 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ADORA2AP29274 412 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ACTR3P61158 418 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 CLDN10P78369 228 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 TBL3Q12788 808 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 TRPC3Q13507 836 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 MXD4Q14582 209 aaPredicted RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 DHDDSQ86SQ9 333 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 TMEM192Q8IY95 271 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 SHKBP1Q8TBC3 707 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 IRGQQ8WZA9 623 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 CCDC124Q96CT7 223 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 SMARCAD1Q9H4L7 1026 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 CHST7Q9NS84 486 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 NEU2Q9Y3R4 380 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ARHGAP10A1A4S6 786 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 PDHXO00330 501 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 PDGFRBP09619 1106 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 UNGP13051 313 aaPredicted RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 INSRRP14616 1297 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 IDO1P14902 403 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ACO1P21399 889 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 SLC5A2P31639 672 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 GEMIN4P57678 1058 aaKnown RBP14.48□□□□□ -0.09
LIG1-203ENST00000536218 CDK16Q00536 496 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 FOLH1Q04609 750 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 ANKRD20A4Q4UJ75 823 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 C6orf183Q5T699 404 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 GPRC5AQ8NFJ5 357 aa14.48□□□□□ -0.09
LIG1-203ENST00000536218 RBM15Q96T37 977 aaKnown RBP eCLIP14.48□□□□□ -0.098e-6■□□□□ 8.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms