RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 DCAF17Q5H9S7 520 aaPredicted RBP13.81□□□□□ -0.2
RTN3-207ENST00000536011 SPDYCQ5MJ68 293 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 ZNF658Q5TYW1 1059 aaPredicted RBP13.81□□□□□ -0.2
RTN3-207ENST00000536011 TCERG1LQ5VWI1 586 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 RNF43Q68DV7 783 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 LPCAT2Q7L5N7 544 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 TMEM25Q86YD3 366 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 SMYD4Q8IYR2 804 aaPredicted RBP13.81□□□□□ -0.2
RTN3-207ENST00000536011 FMR1NBQ8N0W7 255 aaPredicted RBP13.81□□□□□ -0.2
RTN3-207ENST00000536011 PGBD3Q8N328 593 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 OLIG1Q8TAK6 271 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 TMEM176AQ96HP8 235 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 UBXN6Q9BZV1 441 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
RTN3-207ENST00000536011 TCRBV21S2A2A0A5A6 115 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 KHNYNO15037 678 aaKnown RBP13.8□□□□□ -0.2
RTN3-207ENST00000536011 TBX18O95935 607 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 TYRP14679 529 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 NTSR1P30989 418 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 P2RY2P41231 377 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 PPP1R2P41236 205 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 COG7P83436 770 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 E2F5Q15329 346 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
RTN3-207ENST00000536011 HMGB4Q8WW32 186 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 EDEM2Q9BV94 578 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
RTN3-207ENST00000536011 STRIP2Q9ULQ0 834 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 STARD13Q9Y3M8 1113 aa13.8□□□□□ -0.2
RTN3-207ENST00000536011 ACACBO00763 2458 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 PSMA7O14818 248 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 GREM1O60565 184 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 ADAM23O75077 832 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 HOXB2P14652 356 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 TBXAS1P24557 533 aaPredicted RBP13.79□□□□□ -0.2
RTN3-207ENST00000536011 CHKAP35790 457 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 PRCPP42785 496 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 DHPSP49366 369 aaPredicted RBP13.79□□□□□ -0.2
RTN3-207ENST00000536011 PGFP49763 221 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 EMC10Q5UCC4 262 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 DAB2IPQ5VWQ8 1189 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 ARHGAP17Q68EM7 881 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 SLC36A4Q6YBV0 504 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 RSRC2Q7L4I2 434 aaKnown RBP13.79□□□□□ -0.2
RTN3-207ENST00000536011 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 CHPFQ8IZ52 775 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 EEF2KMTQ96G04 330 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 DCBLD2Q96PD2 775 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 NMUR1Q9HB89 426 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 USP3Q9Y6I4 520 aa13.79□□□□□ -0.2
RTN3-207ENST00000536011 MYOFQ9NZM1 2061 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 CNOT1A5YKK6 2376 aaKnown RBP13.78□□□□□ -0.2
RTN3-207ENST00000536011 STC2O76061 302 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
RTN3-207ENST00000536011 BCKDHBP21953 392 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 HOXD12P35452 270 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 DGKGP49619 791 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 BCAT1P54687 386 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 RAD23BP54727 409 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 CUL2Q13617 745 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 TCEAL6Q6IPX3 200 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 Q6ZNB5 142 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
RTN3-207ENST00000536011 TCEAL3Q969E4 200 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 WBP2Q969T9 261 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
RTN3-207ENST00000536011 OLA1Q9NTK5 396 aaKnown RBP13.78□□□□□ -0.2
RTN3-207ENST00000536011 RASAL2Q9UJF2 1139 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
RTN3-207ENST00000536011 TPRP12270 2363 aaKnown RBP13.78□□□□□ -0.2
RTN3-207ENST00000536011 LNP1A1A4G5 178 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 GFRA2O00451 464 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 NPC1O15118 1278 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 MDM4O15151 490 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 AP5Z1O43299 807 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 ZNF217O75362 1048 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 CYBBP04839 570 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.212e-12■■■□□ 15.2
RTN3-207ENST00000536011 CETN1Q12798 172 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 EFEMP1Q12805 493 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 LMAN2Q12907 356 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 SGO2Q562F6 1265 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
RTN3-207ENST00000536011 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms