RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 SCAMP3O14828 347 aaKnown RBP12.46□□□□□ -0.41
KNTC1-208ENST00000535410 MED7O43513 233 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 SLC6A11P48066 632 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 STX17P56962 302 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 PDE4CQ08493 712 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 CRY1Q16526 586 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 CAMK4Q16566 473 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 LPAL2Q16609 132 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 GAB4Q2WGN9 574 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 NAIF1Q69YI7 327 aaPredicted RBP12.46□□□□□ -0.41
KNTC1-208ENST00000535410 GRAMD4Q6IC98 578 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 PKN3Q6P5Z2 889 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 SCD5Q86SK9 330 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 TMEM25Q86YD3 366 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 CREBRFQ8IUR6 639 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 FAM114A1Q8IWE2 563 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 SCML4Q8N228 414 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 ZC3H10Q96K80 434 aaKnown RBP12.46□□□□□ -0.41
KNTC1-208ENST00000535410 HHIPQ96QV1 700 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 NMUR1Q9HB89 426 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 C2orf42Q9NWW7 574 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 OSER1Q9NX31 292 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 MARK1Q9P0L2 795 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 MARCH2Q9P0N8 246 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
KNTC1-208ENST00000535410 KIF26AQ9ULI4 1882 aaPredicted RBP12.46□□□□□ -0.42
KNTC1-208ENST00000535410 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 O00370 1275 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 NPC1O15118 1278 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 CACNG3O60359 315 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 TULP3O75386 442 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 STC2O76061 302 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 FBXO21O94952 628 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 TYRP14679 529 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 TIE1P35590 1138 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 HARS2P49590 506 aaKnown RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 PGFP49763 221 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 MFAP3P55082 362 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 ZNF445P59923 1031 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 SPEM2Q0P670 501 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 EFEMP1Q12805 493 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 CSRP2Q16527 193 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 TTC30AQ86WT1 665 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 ETFBKMTQ8IXQ9 262 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 FAM160A2Q8N612 972 aaPredicted RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 NAT16Q8N8M0 369 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 TERB1Q8NA31 727 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 IRGQQ8WZA9 623 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 EZH1Q92800 747 aaPredicted RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 PLD4Q96BZ4 506 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 CNOT6LQ96LI5 555 aaKnown RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 HSFY1Q96LI6 401 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 TRIM62Q9BVG3 475 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 ABCC13Q9NSE7 274 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 DNAJC17Q9NVM6 304 aaKnown RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 CDV3Q9UKY7 258 aaKnown RBP12.45□□□□□ -0.42
KNTC1-208ENST00000535410 STARD13Q9Y3M8 1113 aa12.45□□□□□ -0.42
KNTC1-208ENST00000535410 SLC12A8A0AV02 714 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 SART1O43290 800 aaKnown RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 KLF8O95600 359 aaPredicted RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 DGKGP49619 791 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 KDSRQ06136 332 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 SRSF5Q13243 272 aaKnown RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 CT47A1Q5JQC4 288 aaPredicted RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 C10orf76Q5T2E6 689 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 BSPRYQ5W0U4 402 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 Q6ZNB5 142 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 TPGS1Q6ZTW0 290 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 RRAGAQ7L523 313 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 DGLUCYQ7Z3D6 616 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 CCDC33Q8N5R6 958 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 ALLCQ8N6M5 410 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 UBR7Q8N806 425 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 ZNF513Q8N8E2 541 aaPredicted RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 TXNDC5Q8NBS9 432 aaKnown RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 RBBP8NLQ8NC74 664 aaPredicted RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 LMO3Q8TAP4 145 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 UBA3Q8TBC4 463 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 UCMAQ8WVF2 138 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 ULBP1Q9BZM6 244 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 INTS2Q9H0H0 1204 aaKnown RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 UBE2TQ9NPD8 197 aaPredicted RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 SEMA4GQ9NTN9 838 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 HBS1LQ9Y450 684 aaKnown RBP12.44□□□□□ -0.42
KNTC1-208ENST00000535410 CFAP54Q96N23 3096 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 MYO15AQ9UKN7 3530 aa12.44□□□□□ -0.42
KNTC1-208ENST00000535410 GTPBP10A4D1E9 387 aaKnown RBP12.43□□□□□ -0.42
KNTC1-208ENST00000535410 M0QYV0 167 aa12.43□□□□□ -0.42
KNTC1-208ENST00000535410 TIMM44O43615 452 aa12.43□□□□□ -0.42
KNTC1-208ENST00000535410 GREM1O60565 184 aa12.43□□□□□ -0.42
KNTC1-208ENST00000535410 KRT5P13647 590 aa12.43□□□□□ -0.42
KNTC1-208ENST00000535410 CORO1AP31146 461 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms