RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 BCCIPQ9P287 314 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 NUDT5Q9UKK9 219 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 USP3Q9Y6I4 520 aa17.03■□□□□ 0.32
CLSTN3-204ENST00000535313 TYRP14679 529 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 PMS1P54277 932 aaKnown RBP17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 GRAMD4Q6IC98 578 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 TPGS1Q6ZTW0 290 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 SCD5Q86SK9 330 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 MIB1Q86YT6 1006 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 ARHGAP18Q8N392 663 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 ZNF276Q8N554 614 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 ZNF513Q8N8E2 541 aaPredicted RBP17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 ANKRD52Q8NB46 1076 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 DDX1Q92499 740 aaKnown RBP17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 METTL14Q9HCE5 456 aaKnown RBP17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.32
CLSTN3-204ENST00000535313 TRIM49BA6NDI0 452 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 CACNG3O60359 315 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 ADAM23O75077 832 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 CAVIN2O95810 425 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 CHRM1P11229 460 aaPredicted RBP17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 PPP1R2P41236 205 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 LIMK1P53667 647 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 COG7P83436 770 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 CUL2Q13617 745 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 PMS2CLQ68D20 193 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 PIGZQ86VD9 579 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 ELOA2Q8IYF1 753 aaPredicted RBP17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 PGBD3Q8N328 593 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 HMGB4Q8WW32 186 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 DHTKD1Q96HY7 919 aaPredicted RBP17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 SPACA7Q96KW9 195 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 SMOC1Q9H4F8 434 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 ZDHHC4Q9NPG8 344 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 RASAL2Q9UJF2 1139 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 ZNF510Q9Y2H8 683 aa17.01■□□□□ 0.31
CLSTN3-204ENST00000535313 CNOT1A5YKK6 2376 aaKnown RBP17■□□□□ 0.31
CLSTN3-204ENST00000535313 TCRBV21S2A2A0A5A6 115 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
CLSTN3-204ENST00000535313 STC2O76061 302 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 EFEMP1Q12805 493 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 BYSLQ13895 437 aaKnown RBP17■□□□□ 0.31
CLSTN3-204ENST00000535313 SGO2Q562F6 1265 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 PPM1JQ5JR12 505 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 ISM2Q6H9L7 571 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 OLIG1Q8TAK6 271 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 SLC35C1Q96A29 364 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 CEP63Q96MT8 703 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 HESX1Q9UBX0 185 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 STRIP2Q9ULQ0 834 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 STARD13Q9Y3M8 1113 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 ABCA7Q8IZY2 2146 aa17■□□□□ 0.31
CLSTN3-204ENST00000535313 MYO18AQ92614 2054 aaKnown RBP17■□□□□ 0.31
CLSTN3-204ENST00000535313 TRIM24O15164 1050 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 ZBTB24O43167 697 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 MAP3K13O43283 966 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 CD19P15391 556 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 BCKDHBP21953 392 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 NTSR1P30989 418 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 TKTL1P51854 596 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 BCAT1P54687 386 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 YWHAGP61981 247 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 GOLGA7BQ2TAP0 167 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 RAB41Q5JT25 222 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 STPG1Q5TH74 334 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 SDE2Q6IQ49 451 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 Q6ZNB5 142 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 CYP2U1Q7Z449 544 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 RLN3Q8WXF3 142 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 DCLK3Q9C098 648 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 LRRC4Q9HBW1 653 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 RXFP3Q9NSD7 469 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 MAN1B1Q9UKM7 699 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 TSPAN16Q9UKR8 245 aa16.99■□□□□ 0.31
CLSTN3-204ENST00000535313 XPO1O14980 1071 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 ZBED1O96006 694 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 HMBSP08397 361 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 HOXB2P14652 356 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 KCNA4P22459 653 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 CORO1AP31146 461 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 CHKAP35790 457 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 P2RY2P41231 377 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 FMO5P49326 533 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 DHPSP49366 369 aaPredicted RBP16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 DGKGP49619 791 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 BST2Q10589 180 aaKnown RBP16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 CETN1Q12798 172 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 LRMPQ12912 555 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 RNF43Q68DV7 783 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 TCEAL6Q6IPX3 200 aa16.98■□□□□ 0.31
CLSTN3-204ENST00000535313 KLHL10Q6JEL2 608 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms