RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ACO1P21399 889 aaKnown RBP10.91□□□□□ -0.66
CSDE1-217ENST00000534699 ZXDBP98169 803 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 CRY1Q16526 586 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 LY6G5CQ5SRR4 150 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 ACBD5Q5T8D3 534 aaPredicted RBP10.91□□□□□ -0.66
CSDE1-217ENST00000534699 PRR23CQ6ZRP0 262 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 GABRG3Q99928 467 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 CCSER2Q9H7U1 834 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 FAM49BQ9NUQ9 324 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 YWHAGP61981 247 aaKnown RBP eCLIP10.91□□□□□ -0.66
CSDE1-217ENST00000534699 PLK5Q496M5 336 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 DCAF17Q5H9S7 520 aaPredicted RBP10.91□□□□□ -0.66
CSDE1-217ENST00000534699 PEAR1Q5VY43 1037 aaPredicted RBP10.91□□□□□ -0.66
CSDE1-217ENST00000534699 RNF43Q68DV7 783 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 DGLUCYQ7Z3D6 616 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 SCD5Q86SK9 330 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 PIGZQ86VD9 579 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 UNC45BQ8IWX7 931 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 C12orf29Q8N999 325 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 GOLGA1Q92805 767 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 GDPD2Q9HCC8 539 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 SEMA4GQ9NTN9 838 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 ASNSD1Q9NWL6 643 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 NAGPAQ9UK23 515 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 USP18Q9UMW8 372 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 NFE2L3Q9Y4A8 694 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 A0A1W2PQH9 124 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 O00370 1275 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 NTSR1P30989 418 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 ENPP2Q13822 863 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 CBWD6Q4V339 395 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 CBWD3Q5JTY5 395 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 CBWD5Q5RIA9 395 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 C10orf120Q5SQS8 335 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 PRR23BQ6ZRT6 265 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.9□□□□□ -0.663e-12■□□□□ 9.4
CSDE1-217ENST00000534699 TTC8Q8TAM2 541 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 LMO3Q8TAP4 145 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 CEP76Q8TAP6 659 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 EZH1Q92800 747 aaPredicted RBP10.9□□□□□ -0.66
CSDE1-217ENST00000534699 TPX2Q9ULW0 747 aaKnown RBP10.9□□□□□ -0.66
CSDE1-217ENST00000534699 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.9□□□□□ -0.66
CSDE1-217ENST00000534699 F5P12259 2224 aa10.9□□□□□ -0.66
CSDE1-217ENST00000534699 RALGAPA1Q6GYQ0 2036 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 TULP3O75386 442 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 STC2O76061 302 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 GLI1P08151 1106 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 CD58P19256 250 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 PMS2CLQ68D20 193 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 BBS7Q8IWZ6 715 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 KIAA2013Q8IYS2 634 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 KDM1BQ8NB78 822 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 TATDN2Q93075 761 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 THAP9Q9H5L6 903 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 TSPAN16Q9UKR8 245 aa10.9□□□□□ -0.67
CSDE1-217ENST00000534699 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.9□□□□□ -0.673e-6■■■■□ 21.1
CSDE1-217ENST00000534699 CISD3P0C7P0 127 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 ERCC5P28715 1186 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 TKTL1P51854 596 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 MFAP3P55082 362 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 SFSWAPQ12872 951 aaKnown RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 RSPO4Q2I0M5 234 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 GOLGA7BQ2TAP0 167 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 NUGGCQ68CJ6 796 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 SIX6OS1Q8N1H7 587 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 RNF139Q8WU17 664 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 SLC35F5Q8WV83 523 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 DUSP15Q9H1R2 295 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 FBRSL1Q9HCM7 1045 aaKnown RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 SMPD4Q9NXE4 827 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 MARCH2Q9P0N8 246 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 BCLAF3A2AJT9 711 aaKnown RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 UPK3BL1B0FP48 263 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 UPK3BL2E5RIL1 263 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 CYP26A1O43174 497 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 P2RY2P41231 377 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 OXCT1P55809 520 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 HNRNPDQ14103 355 aaKnown RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 SMYD4Q8IYR2 804 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-217ENST00000534699 IL17RCQ8NAC3 791 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 NMUR1Q9HB89 426 aa10.89□□□□□ -0.67
CSDE1-217ENST00000534699 KLF8O95600 359 aaPredicted RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 OXTRP30559 389 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 HARS2P49590 506 aaKnown RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 DGKGP49619 791 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 PMS1P54277 932 aaKnown RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 DAOAP59103 153 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 BPIFB4P59827 614 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 DMWDQ09019 674 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 IFRD2Q12894 506 aaPredicted RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 LPCAT2Q7L5N7 544 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 GPRIN1Q7Z2K8 1008 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 KIAA0907Q7Z7F0 614 aaPredicted RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 TTC30AQ86WT1 665 aa10.88□□□□□ -0.67
CSDE1-217ENST00000534699 C12orf50Q8NA57 414 aaPredicted RBP10.88□□□□□ -0.67
CSDE1-217ENST00000534699 RMDN1Q96DB5 314 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms