RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 CLIC5Q9NZA1 410 aa18.46■□□□□ 0.55
CAPN5-207ENST00000533889 WDR35Q9P2L0 1181 aa18.46■□□□□ 0.55
CAPN5-207ENST00000533889 USP3Q9Y6I4 520 aa18.46■□□□□ 0.55
CAPN5-207ENST00000533889 PSMA7O14818 248 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 TRIM24O15164 1050 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 GREM1O60565 184 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 TYRP14679 529 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 HNRNPLP14866 589 aaKnown RBP eCLIP18.45■□□□□ 0.54
CAPN5-207ENST00000533889 LRMPQ12912 555 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 CUL2Q13617 745 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 PLA2G2CQ5R387 149 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 ARHGAP17Q68EM7 881 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 IL31Q6EBC2 164 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 TRMT11Q7Z4G4 463 aaKnown RBP18.45■□□□□ 0.54
CAPN5-207ENST00000533889 PIGZQ86VD9 579 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 ZC3H3Q8IXZ2 948 aaKnown RBP18.45■□□□□ 0.54
CAPN5-207ENST00000533889 ZNF513Q8N8E2 541 aaPredicted RBP18.45■□□□□ 0.54
CAPN5-207ENST00000533889 TERB1Q8NA31 727 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 ANKRD52Q8NB46 1076 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 KCNV2Q8TDN2 545 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 DHTKD1Q96HY7 919 aaPredicted RBP18.45■□□□□ 0.54
CAPN5-207ENST00000533889 CDK5RAP1Q96SZ6 601 aaKnown RBP18.45■□□□□ 0.54
CAPN5-207ENST00000533889 UBXN6Q9BZV1 441 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 COQ4Q9Y3A0 265 aa18.45■□□□□ 0.54
CAPN5-207ENST00000533889 MAP3K13O43283 966 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 ADAM23O75077 832 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 CAVIN2O95810 425 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 YWHAEP62258 255 aaKnown RBP18.44■□□□□ 0.54
CAPN5-207ENST00000533889 EFEMP1Q12805 493 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 ARHGAP18Q8N392 663 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 ZNF276Q8N554 614 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 HMGB4Q8WW32 186 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 BHMTQ93088 406 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 METTL14Q9HCE5 456 aaKnown RBP18.44■□□□□ 0.54
CAPN5-207ENST00000533889 RXFP3Q9NSD7 469 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 RASAL2Q9UJF2 1139 aa18.44■□□□□ 0.54
CAPN5-207ENST00000533889 TCRBV21S2A2A0A5A6 115 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 STC2O76061 302 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 HMBSP08397 361 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 CHRM1P11229 460 aaPredicted RBP18.43■□□□□ 0.54
CAPN5-207ENST00000533889 CD19P15391 556 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 KCNA4P22459 653 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 TKTL1P51854 596 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 COG7P83436 770 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 GOLGA7BQ2TAP0 167 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 CCDC40Q4G0X9 1142 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 SGO2Q562F6 1265 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 PPM1JQ5JR12 505 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 PMS2CLQ68D20 193 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 SDE2Q6IQ49 451 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 KLHL10Q6JEL2 608 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 RSRC2Q7L4I2 434 aaKnown RBP18.43■□□□□ 0.54
CAPN5-207ENST00000533889 RLN3Q8WXF3 142 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 SLC35C1Q96A29 364 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 SPACA7Q96KW9 195 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 MARK1Q9P0L2 795 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 HESX1Q9UBX0 185 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 MAN1B1Q9UKM7 699 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 ZNF510Q9Y2H8 683 aa18.43■□□□□ 0.54
CAPN5-207ENST00000533889 BCLAF3A2AJT9 711 aaKnown RBP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 ZBTB24O43167 697 aaPredicted RBP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 CACNG3O60359 315 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 BCKDHBP21953 392 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 PPP1R2P41236 205 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 WASP42768 502 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 DHPSP49366 369 aaPredicted RBP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 LIMK1P53667 647 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 YWHAGP61981 247 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 BYSLQ13895 437 aaKnown RBP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 RAB41Q5JT25 222 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 STPG1Q5TH74 334 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 TCEAL6Q6IPX3 200 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 Q6ZNB5 142 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 ABCA7Q8IZY2 2146 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 OLIG1Q8TAK6 271 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 DDX1Q92499 740 aaKnown RBP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 TCEAL3Q969E4 200 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 CEP63Q96MT8 703 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 DCLK3Q9C098 648 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 LRRC4Q9HBW1 653 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 PLK2Q9NYY3 685 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 TSPAN16Q9UKR8 245 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 STRIP2Q9ULQ0 834 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 STARD13Q9Y3M8 1113 aa18.42■□□□□ 0.54
CAPN5-207ENST00000533889 MYO18AQ92614 2054 aaKnown RBP18.42■□□□□ 0.54
CAPN5-207ENST00000533889 THADAQ6YHU6 1953 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 NCOR2Q9Y618 2525 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 ZBED1O96006 694 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 KLKB1P03952 638 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 HOXB2P14652 356 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 CD44P16070 742 aaKnown RBP18.41■□□□□ 0.54
CAPN5-207ENST00000533889 TBXAS1P24557 533 aaPredicted RBP18.41■□□□□ 0.54
CAPN5-207ENST00000533889 NTSR1P30989 418 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 FMO5P49326 533 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 DGKGP49619 791 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 BCAT1P54687 386 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 PDE4CQ08493 712 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 CYP2U1Q7Z449 544 aa18.41■□□□□ 0.54
CAPN5-207ENST00000533889 ELOA2Q8IYF1 753 aaPredicted RBP18.41■□□□□ 0.54
CAPN5-207ENST00000533889 CHPFQ8IZ52 775 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms