RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 DNMT3LQ9UJW3 386 aa22.81■■□□□ 1.24
VPS51-212ENST00000533656 ARHGAP26Q9UNA1 814 aa22.81■■□□□ 1.24
VPS51-212ENST00000533656 ZNF638Q14966 1978 aaKnown RBP22.8■■□□□ 1.24
VPS51-212ENST00000533656 MYO16Q9Y6X6 1858 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 C2CD4DB7Z1M9 353 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 CAPN9O14815 690 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 COCHO43405 550 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 DAB1O75553 588 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 PGFP49763 221 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 C10orf120Q5SQS8 335 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 HFE2Q6ZVN8 426 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 DDX42Q86XP3 938 aaKnown RBP eCLIP22.8■■□□□ 1.24
VPS51-212ENST00000533656 PDLIM2Q96JY6 352 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 RPGRIP1Q96KN7 1286 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 LUC7LQ9NQ29 371 aaKnown RBP22.8■■□□□ 1.24
VPS51-212ENST00000533656 SCINQ9Y6U3 715 aa22.8■■□□□ 1.24
VPS51-212ENST00000533656 ANKRD62A6NC57 917 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 IPO7O95373 1038 aaKnown RBP22.79■■□□□ 1.24
VPS51-212ENST00000533656 NCAM1P13591 858 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 TCF3P15923 654 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 C2CD6Q53TS8 623 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 DNAJC24Q6P3W2 148 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 ARID3BQ8IVW6 561 aaPredicted RBP22.79■■□□□ 1.24
VPS51-212ENST00000533656 KIAA1958Q8N8K9 716 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 ARL14EPQ8N8R7 260 aaPredicted RBP22.79■■□□□ 1.24
VPS51-212ENST00000533656 PIWIL1Q96J94 861 aaKnown RBP22.79■■□□□ 1.24
VPS51-212ENST00000533656 ZSWIM3Q96MP5 696 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 SELENOOQ9BVL4 669 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 TDP1Q9NUW8 608 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 PARVAQ9NVD7 372 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 KMT2EQ8IZD2 1858 aa22.79■■□□□ 1.24
VPS51-212ENST00000533656 EIF3CLB5ME19 914 aaKnown RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 GOLGA8SH3BPF8 625 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 LCA5LO95447 670 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 MBL2P11226 248 aaPredicted RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 KRT3P12035 628 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 SP100P23497 879 aaPredicted RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 NOS2P35228 1153 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 KPNA1P52294 538 aaPredicted RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 NNTQ13423 1086 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 FAM78AQ5JUQ0 283 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 CELF5Q8N6W0 485 aaKnown RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 ZNF653Q96CK0 615 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 EIF3CQ99613 913 aaKnown RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 RNF38Q9H0F5 515 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 ZFP14Q9HCL3 533 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 MRPL47Q9HD33 250 aaKnown RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 TMEM59LQ9UK28 342 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 INTUQ9ULD6 942 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 STAP1Q9ULZ2 295 aa22.78■■□□□ 1.24
VPS51-212ENST00000533656 ARIH1Q9Y4X5 557 aaPredicted RBP22.78■■□□□ 1.24
VPS51-212ENST00000533656 OBSL1O75147 1896 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 MYO10Q9HD67 2058 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 SIGLEC16A6NMB1 481 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 ANHXE9PGG2 379 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 DPYSL4O14531 572 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 ECI2O75521 394 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 FYNP06241 537 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 H2AFZP0C0S5 128 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 RRM1P23921 792 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 MATKP42679 507 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 COG7P83436 770 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 SPA17Q15506 151 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 PLEKHA7Q6IQ23 1121 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 H2AFVQ71UI9 128 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 TMEM139Q8IV31 216 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 EDEM1Q92611 657 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 ELSPBP1Q96BH3 223 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 SERPINB11Q96P15 392 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 SLC22A12Q96S37 553 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 SMOC2Q9H3U7 446 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 METTL5Q9NRN9 209 aaKnown RBP22.77■■□□□ 1.24
VPS51-212ENST00000533656 SPTLC3Q9NUV7 552 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.77■■□□□ 1.24
VPS51-212ENST00000533656 MARCH2Q9P0N8 246 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 IGSF9Q9P2J2 1179 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 CNOT8Q9UFF9 292 aaKnown RBP22.77■■□□□ 1.24
VPS51-212ENST00000533656 HBS1LQ9Y450 684 aaKnown RBP22.77■■□□□ 1.24
VPS51-212ENST00000533656 CPQQ9Y646 472 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 ZDBF2Q9HCK1 2354 aa22.77■■□□□ 1.24
VPS51-212ENST00000533656 PIEZO1Q92508 2521 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 TCRBV5S1A1TA0A578 114 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 NDUFA10O95299 355 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 GPC5P78333 572 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 EFEMP1Q12805 493 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 TAF5Q15542 800 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 DCAF6Q58WW2 860 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 POTEHQ6S545 545 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 DEFB106AQ8N104 65 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 DEPDC1BQ8WUY9 529 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 CTNNBL1Q8WYA6 563 aaPredicted RBP22.76■■□□□ 1.23
VPS51-212ENST00000533656 EDAQ92838 391 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 USP13Q92995 863 aaPredicted RBP22.76■■□□□ 1.23
VPS51-212ENST00000533656 CYP2S1Q96SQ9 504 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 RASAL2Q9UJF2 1139 aa22.76■■□□□ 1.23
VPS51-212ENST00000533656 EPN1Q9Y6I3 576 aaPredicted RBP22.76■■□□□ 1.23
VPS51-212ENST00000533656 FAM170AA1A519 330 aa22.75■■□□□ 1.23
VPS51-212ENST00000533656 SOWAHDA6NJG2 315 aa22.75■■□□□ 1.23
VPS51-212ENST00000533656 GRAP2O75791 330 aa22.75■■□□□ 1.23
VPS51-212ENST00000533656 PRAMEF12O95522 483 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms