RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 DDX6P26196 483 aaKnown RBP eCLIP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 NOS2P35228 1153 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 ARHGAP25P42331 645 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 MATKP42679 507 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 PITX1P78337 314 aaPredicted RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 ARHGAP15Q53QZ3 475 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 HS1BP3Q53T59 392 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 GPR158Q5T848 1215 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 RHOT2Q8IXI1 618 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 MAB21L3Q8N8X9 362 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 DQX1Q8TE96 717 aaKnown RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 RNF139Q8WU17 664 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 NT5C3BQ969T7 300 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 BTBD6Q96KE9 485 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 ZSWIM3Q96MP5 696 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 CDK5RAP1Q96SZ6 601 aaKnown RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 NPY6RQ99463 290 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 RNF38Q9H0F5 515 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 POMKQ9H5K3 350 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 TRPC7Q9HCX4 862 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 OSGEPQ9NPF4 335 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 TRIM10Q9UDY6 481 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 DOCK6Q96HP0 2047 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 BRWD1Q9NSI6 2320 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 SOBPA7XYQ1 873 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 DPYSL4O14531 572 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 MBTPS2O43462 519 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 PFKLP17858 780 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 HDCP19113 662 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 GPD1P21695 349 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 ATP5C1P36542 298 aaKnown RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 PTPN9P43378 593 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 ZNF143P52747 638 aaPredicted RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 ZNF252P-AS1Q0IIN9 211 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 EFEMP1Q12805 493 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 KIF5AQ12840 1032 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 SMAD4Q13485 552 aaKnown RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 CBX2Q14781 532 aaPredicted RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 SLC25A52Q3SY17 297 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 LEXMQ3ZCV2 418 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 OTUD1Q5VV17 481 aaPredicted RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 KLHDC10Q6PID8 442 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 ZNF662Q6ZS27 426 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 TADA2BQ86TJ2 420 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 TAC4Q86UU9 113 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 REXO1L1PQ8IX06 675 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 NPAS3Q8IXF0 933 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 ARL14EPQ8N8R7 260 aaPredicted RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 CFAP57Q96MR6 1250 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 NECTIN4Q96NY8 510 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 TBCBQ99426 244 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 CNPY3Q9BT09 278 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 OLA1Q9NTK5 396 aaKnown RBP12.44□□□□□ -0.42
COMMD9-208ENST00000533643 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 MARCH2Q9P0N8 246 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 DNMT3LQ9UJW3 386 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
COMMD9-208ENST00000533643 C2orf16Q68DN1 1984 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 XIRP2A4UGR9 3374 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 SPTBN5Q9NRC6 3674 aaKnown RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 MYO16Q9Y6X6 1858 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 TRAV19A0A0A6YYK7 116 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 ENDOD1O94919 500 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 OLFM2O95897 454 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 TRUB2O95900 331 aaKnown RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 IGLV3-25P01717 112 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 SDC4P31431 198 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 SULT1E1P49888 294 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 HADHBP55084 474 aaKnown RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 ATP11AP98196 1134 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 C15orf59Q2T9L4 293 aaPredicted RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 SH3PXD2AQ5TCZ1 1133 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 GET4Q7L5D6 327 aaPredicted RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 BNIPLQ7Z465 357 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 CMTM8Q8IZV2 173 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 ADAM32Q8TC27 787 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 FNIP1Q8TF40 1166 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 CENPIQ92674 756 aaPredicted RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 FGF13Q92913 245 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 ZFRQ96KR1 1074 aaKnown RBP12.43□□□□□ -0.42
COMMD9-208ENST00000533643 MYADMQ96S97 322 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 SLITRK6Q9H5Y7 841 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 GDE1Q9NZC3 331 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 CALCOCO1Q9P1Z2 691 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 IP6K2Q9UHH9 426 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 SFMBT1Q9UHJ3 866 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 RASAL2Q9UJF2 1139 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms