RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 MCOLN2Q8IZK6 566 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 KRT222Q8N1A0 295 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 ADAMTS19Q8TE59 1207 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 RSAD2Q8WXG1 361 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 EDEM1Q92611 657 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 ELSPBP1Q96BH3 223 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 SLC2A13Q96QE2 648 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 KLF16Q9BXK1 252 aaPredicted RBP13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 OBP2AQ9NY56 170 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 NUMBLQ9Y6R0 609 aa13.32□□□□□ -0.28
RPUSD4-208ENST00000533628 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 MDM4O15151 490 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 RALAP11233 206 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 YWHAZP63104 245 aaKnown RBP13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 EFHC1Q5JVL4 640 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 BTBD8Q5XKL5 378 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 MTSS1LQ765P7 747 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 SPC24Q8NBT2 197 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 NXPE3Q969Y0 559 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 KCNK12Q9HB15 430 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 ZFP14Q9HCL3 533 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 TDP1Q9NUW8 608 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 ZNHIT6Q9NWK9 470 aaKnown RBP13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 TMEM59LQ9UK28 342 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 NAALADL1Q9UQQ1 740 aa13.31□□□□□ -0.28
RPUSD4-208ENST00000533628 RTN2O75298 545 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 FTLP02792 175 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 CKMP06732 381 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 ASGR2P07307 311 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 ATP5C1P36542 298 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 AVPR1AP37288 418 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 SYPL2Q5VXT5 272 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 TRNP1Q6NT89 227 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 VITQ6UXI7 678 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 GJD3Q8N144 294 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 CELF5Q8N6W0 485 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 MSANTD4Q8NCY6 345 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 WBP2Q969T9 261 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 KXD1Q9BQD3 176 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 NHEJ1Q9H9Q4 299 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 IGSF9Q9P2J2 1179 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 CPQQ9Y646 472 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 KIF26AQ9ULI4 1882 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 HEPACAM2A8MVW5 462 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 TMCO5BA8MYB1 307 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 GREM1O60565 184 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 HSF2BPO75031 334 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 CALB1P05937 261 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 MBL2P11226 248 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 USP4Q13107 963 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 EIF4EBP2Q13542 120 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 ZNF77Q15935 545 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 PPP1R2P3Q6NXS1 205 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 ARCQ7LC44 396 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 C17orf53Q8N3J3 647 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 E2F7Q96AV8 911 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 CDK5RAP1Q96SZ6 601 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 KIF9Q9HAQ2 790 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 POPDC2Q9HBU9 364 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 FAM53CQ9NYF3 392 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 WDR35Q9P2L0 1181 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 FEZ2Q9UHY8 353 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 DNMT3LQ9UJW3 386 aa13.3□□□□□ -0.28
RPUSD4-208ENST00000533628 DAB1O75553 588 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 GRAP2O75791 330 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 IGLV3-25P01717 112 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 GFPT1Q06210 699 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 SLC18A3Q16572 532 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 PHLDB2Q86SQ0 1253 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 TADA2BQ86TJ2 420 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 MFSD6LQ8IWD5 586 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 DEFB106AQ8N104 65 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 DQX1Q8TE96 717 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 SH3RF2Q8TEC5 729 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 FAM149B1Q96BN6 582 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 OLA1Q9NTK5 396 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 SMPD4Q9NXE4 827 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 STRIP2Q9ULQ0 834 aa13.29□□□□□ -0.28
RPUSD4-208ENST00000533628 GOLGA8SH3BPF8 625 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 LEFTY2O00292 366 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 GJB6O95452 261 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 NCAM1P13591 858 aa13.28□□□□□ -0.28
RPUSD4-208ENST00000533628 RRM1P23921 792 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms