RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SH3GL2Q99962 352 aa12.83□□□□□ -0.36
RAD50-209ENST00000533482 TMEM120AQ9BXJ8 343 aa12.83□□□□□ -0.36
RAD50-209ENST00000533482 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.36
RAD50-209ENST00000533482 SNCAIPQ9Y6H5 919 aa12.83□□□□□ -0.36
RAD50-209ENST00000533482 SPDYE5A6NIY4 337 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 KIF3CO14782 793 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ASS1P00966 412 aaKnown RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 DPYSL3Q14195 570 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 DCP1BQ8IZD4 617 aaKnown RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 FAM96AQ9H5X1 160 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 RXFP1Q9HBX9 757 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 MOSPD1Q9UJG1 213 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 PCDHB7Q9Y5E2 793 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 CREB1P16220 341 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 DRD4P21917 467 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 KCNA4P22459 653 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 TRIP10Q15642 601 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 CTXN3Q4LDR2 81 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 DNAJC9Q8WXX5 260 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ZNF75CPQ92670 426 aaPredicted RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 USP6NLQ92738 828 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 C18orf25Q96B23 403 aaPredicted RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 MAGEB5Q9BZ81 275 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 MUC3BQ9H195 1237 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 CXorf56Q9H5V9 222 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ARHGEF38Q9NXL2 777 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 BAG5Q9UL15 447 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 TNFSF13BQ9Y275 285 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ENO4A6NNW6 628 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 AVILO75366 819 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 CHEK2O96017 543 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 MT-CO1P00395 513 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 USP17L7P0C7H9 530 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 CHRNB2P17787 502 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ANKRD20A4Q4UJ75 823 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ZC3H12AQ5D1E8 599 aaKnown RBP12.82□□□□□ -0.36
RAD50-209ENST00000533482 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 C16orf46Q6P387 395 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 FRA10AC1Q70Z53 315 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 SUN2Q9UH99 717 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
RAD50-209ENST00000533482 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 NUDT17P0C025 328 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SERPINB4P48594 390 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 PDE1CQ14123 709 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 EFTUD2Q15029 972 aaKnown RBP eCLIP12.81□□□□□ -0.361e-8■□□□□ 11
RAD50-209ENST00000533482 PDCD2Q16342 344 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 C12orf56Q8IXR9 622 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 TRIML2Q8N7C3 387 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 PPHLN1Q8NEY8 458 aaKnown RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 FBXO32Q969P5 355 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 CHST12Q9NRB3 414 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 APOC4-APOC2K7ER74 178 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 CLDN5O00501 218 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 APOC2P02655 101 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SERPINB3P29508 390 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 CDC25CP30307 473 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 KCNJ2P63252 427 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 RASA2Q15283 850 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 PTPN20Q4JDL3 420 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 ST13P4Q8IZP2 240 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 SH3TC2Q8TF17 1288 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SDCCAG3Q96C92 435 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SRPK1Q96SB4 655 aaKnown RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 EGFL8Q99944 293 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 A0A1W2PPM1 405 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 WDR27A2RRH5 827 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 TSPAN3O60637 253 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SNX2O60749 519 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SP2Q02086 613 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 FSTL1Q12841 308 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 BLOC1S5Q8TDH9 187 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 C12orf65Q9H3J6 166 aaKnown RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 CYP4F12Q9HCS2 524 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 IARS2Q9NSE4 1012 aaKnown RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 ZNF142P52746 1687 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 MANSC4A6NHS7 340 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 ATP6V1G2O95670 118 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 UBTFL6P0CB48 400 aaPredicted RBP12.81□□□□□ -0.36
RAD50-209ENST00000533482 MGAT1P26572 445 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 STRA8Q7Z7C7 330 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 UNC45BQ8IWX7 931 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 POU5F2Q8N7G0 328 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 TMEM169Q96HH4 297 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms