RNA–Protein interactions for RNA: ENST00000532886.2

AP004608.1-204, humanhuman

TSL 2

Gene AP004608.1, Length 4,435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-204ENST00000532886 CUL3Q13618 768 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 BMPR2Q13873 1038 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 ZNF280DQ6N043 979 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 PRUNE1Q86TP1 453 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 DDIASQ8IXT1 998 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 HTR3CQ8WXA8 447 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 SEPT8Q92599 483 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 SGF29Q96ES7 293 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 PGM2Q96G03 612 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 SMARCD1Q96GM5 515 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 SHANK3Q9BYB0 1731 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 ADA2Q9NZK5 511 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 NUP98P52948 1817 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 HSPA8P11142 646 aaKnown RBP13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 GANCQ8TET4 914 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 SIX2Q9NPC8 291 aa13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
AP004608.1-204ENST00000532886 HOXC6P09630 235 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 GRM5P41594 1212 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 TTMPQ5BVD1 217 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 VCX3AQ9NNX9 186 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 FAM8A1Q9UBU6 413 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 COG5Q9UP83 839 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 CNTNAP1P78357 1384 aa13.02□□□□□ -0.32
AP004608.1-204ENST00000532886 DCDC2CA8MYV0 355 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 LTFP02788 710 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 USP17L7P0C7H9 530 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 PYGBP11216 843 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 CCR1P32246 355 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 SLC11A2P49281 568 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 HSFY1Q96LI6 401 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 MAF1Q9H063 256 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 DMAP1Q9NPF5 467 aaPredicted RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 RRN3Q9NYV6 651 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 GPR25O00155 361 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 GNGT2O14610 69 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 GSTA4O15217 222 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 NCAM2O15394 837 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 LIASO43766 372 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 FKTNO75072 461 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 RPL10AP62906 217 aaKnown RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 SP3Q02447 781 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 LAMB3Q13751 1172 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 EFTUD2Q15029 972 aaKnown RBP eCLIP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ANKRD20A4Q4UJ75 823 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ANKRD20A2Q5SQ80 823 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ANKRD20A1Q5TYW2 823 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 MREGQ8N565 214 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 SPDL1Q96EA4 605 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ZBTB18Q99592 522 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 RBPJLQ9UBG7 517 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 TMEM191CA6NGB0 347 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 CA12O43570 354 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 SHBGP04278 402 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 NPNTQ6UXI9 565 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 TSHZ1Q6ZSZ6 1077 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 JOSD2Q8TAC2 188 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 FGD4Q96M96 766 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 POPDC2Q9HBU9 364 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 RBM22Q9NW64 420 aaKnown RBP eCLIP13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
AP004608.1-204ENST00000532886 A0A0G2JLL6 359 aaPredicted RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 H7C4K7 107 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 HOXA2O43364 376 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 NOS2P35228 1153 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 NR2C2P49116 596 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 RAD23BP54727 409 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 PTPN20Q4JDL3 420 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 PRRT2Q7Z6L0 340 aaPredicted RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 BLOC1S5Q8TDH9 187 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 AJAP1Q9UKB5 411 aaPredicted RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 NUDT5Q9UKK9 219 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 DRG1Q9Y295 367 aaKnown RBP13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 B2RBV5 119 aa13.01□□□□□ -0.33
AP004608.1-204ENST00000532886 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 298.1 ms