RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 RSRC2Q7L4I2 434 aaKnown RBP20.8■□□□□ 0.92
CPSF1-209ENST00000532725 MIB1Q86YT6 1006 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 CPA6Q8N4T0 437 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 EPS8L1Q8TE68 723 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 PPP1R13BQ96KQ4 1090 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 SPAG5Q96R06 1193 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 CPXM1Q96SM3 734 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 MARCH2Q9P0N8 246 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 TJP2Q9UDY2 1190 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 GOLGA6L19H0YKK7 550 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 LTFP02788 710 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 NUBP1P53384 320 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 NR1H3Q13133 447 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 DHCR24Q15392 516 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 BBS7Q8IWZ6 715 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 C1orf131Q8NDD1 294 aaKnown RBP20.79■□□□□ 0.92
CPSF1-209ENST00000532725 OTUB2Q96DC9 234 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 OLA1Q9NTK5 396 aaKnown RBP20.79■□□□□ 0.92
CPSF1-209ENST00000532725 RASAL2Q9UJF2 1139 aa20.79■□□□□ 0.92
CPSF1-209ENST00000532725 NOCTQ9UK39 431 aaKnown RBP20.79■□□□□ 0.92
CPSF1-209ENST00000532725 NDRG2Q9UN36 371 aaKnown RBP20.79■□□□□ 0.92
CPSF1-209ENST00000532725 TRDMT1O14717 391 aaKnown RBP20.78■□□□□ 0.92
CPSF1-209ENST00000532725 SART1O43290 800 aaKnown RBP20.78■□□□□ 0.92
CPSF1-209ENST00000532725 STC2O76061 302 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 NFATC1O95644 943 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 KLKB1P03952 638 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 AMPD2Q01433 879 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 GOLGA8FQ08AF8 430 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 GOLGA8DPQ0D2H9 430 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 GAB4Q2WGN9 574 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 TAF3Q5VWG9 929 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 Q6ZNB5 142 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 ZNF677Q86XU0 584 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 TMEM35BQ8NCS4 154 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 RNF139Q8WU17 664 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 TSPY26PQ9H489 355 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 SFMBT1Q9UHJ3 866 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 RAPGEFL1Q9UHV5 662 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 STRIP2Q9ULQ0 834 aa20.78■□□□□ 0.92
CPSF1-209ENST00000532725 SLC12A8A0AV02 714 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 NCAM2O15394 837 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 CYP17A1P05093 508 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 MMEP08473 750 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 CHRNB1P11230 501 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 CHRNB2P17787 502 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 RPS9P46781 194 aaKnown RBP20.77■□□□□ 0.92
CPSF1-209ENST00000532725 GALK1P51570 392 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 UBASH3AP57075 661 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 PON2Q15165 354 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 MSANTD2Q6P1R3 559 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 BEND5Q7L4P6 421 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 FMNL3Q8IVF7 1028 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 DTWD2Q8NBA8 298 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 SLC20A1Q8WUM9 679 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 NOX5Q96PH1 765 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 KCNH6Q9H252 994 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 PDCL3Q9H2J4 239 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 LMAN1LQ9HAT1 526 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 FBRSL1Q9HCM7 1045 aaKnown RBP20.77■□□□□ 0.92
CPSF1-209ENST00000532725 CEP83Q9Y592 693 aa20.77■□□□□ 0.92
CPSF1-209ENST00000532725 KMT2EQ8IZD2 1858 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 ERBB2P04626 1255 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 CDR2Q01850 454 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 TRIP4Q15650 581 aaPredicted RBP20.76■□□□□ 0.91
CPSF1-209ENST00000532725 PTPN20Q4JDL3 420 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 TMEM196Q5HYL7 178 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 NAIF1Q69YI7 327 aaPredicted RBP20.76■□□□□ 0.91
CPSF1-209ENST00000532725 CACNA2D4Q7Z3S7 1137 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 BAP1Q92560 729 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 GOLGA1Q92805 767 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 LSM7Q9UK45 103 aaKnown RBP20.76■□□□□ 0.91
CPSF1-209ENST00000532725 NAALADL1Q9UQQ1 740 aa20.76■□□□□ 0.91
CPSF1-209ENST00000532725 HBS1LQ9Y450 684 aaKnown RBP20.76■□□□□ 0.91
CPSF1-209ENST00000532725 GALR2O43603 387 aaPredicted RBP20.75■□□□□ 0.91
CPSF1-209ENST00000532725 LSM8O95777 96 aaKnown RBP20.75■□□□□ 0.91
CPSF1-209ENST00000532725 HMBSP08397 361 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 NCAM1P13591 858 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 PBX1P40424 430 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 GABRB2P47870 512 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 SNX16P57768 344 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 YWHAZP63104 245 aaKnown RBP20.75■□□□□ 0.91
CPSF1-209ENST00000532725 FMO1Q01740 532 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 TAF5Q15542 800 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 LY6G5CQ5SRR4 150 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 SYPL2Q5VXT5 272 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 TMEM25Q86YD3 366 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 FAM149B1Q96BN6 582 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 PIWIL1Q96J94 861 aaKnown RBP20.75■□□□□ 0.91
CPSF1-209ENST00000532725 DCLK3Q9C098 648 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 SPHK2Q9NRA0 654 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 MYO6Q9UM54 1294 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 ZNF510Q9Y2H8 683 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 HCN4Q9Y3Q4 1203 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 WDFY4Q6ZS81 3184 aa20.75■□□□□ 0.91
CPSF1-209ENST00000532725 CYP1A1P04798 512 aaPredicted RBP20.74■□□□□ 0.91
CPSF1-209ENST00000532725 GLI1P08151 1106 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 OPRD1P41143 372 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 MAGEA9P43362 315 aa20.74■□□□□ 0.91
CPSF1-209ENST00000532725 ZNF445P59923 1031 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms