RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	LRRC32	Q14392	662 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	DGKK	Q5KSL6	1271 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	TSSK4	Q6SA08	328 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	C12orf40	Q86WS4	652 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	TMEM25	Q86YD3	366 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	SCML4	Q8N228	414 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	CD101	Q93033	1021 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	CDK5RAP1	Q96SZ6	601 aa	Known RBP	18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	NAT10	Q9H0A0	1025 aa	Known RBP	18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	GAN	Q9H2C0	597 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	TJP2	Q9UDY2	1190 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	SFMBT1	Q9UHJ3	866 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	SIK3	Q9Y2K2	1263 aa		18.25	■□□□□ 0.51
CTSB-223	ENST00000532370	SLC12A8	A0AV02	714 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	ANTXRL	A6NF34	631 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	LGALS16	A8MUM7	142 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	TPM2	P07951	284 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	SP9	P0CG40	484 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	HOXC13	P31276	330 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	CSTF1	Q05048	431 aa	Known RBP	18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	GOLGA8F	Q08AF8	430 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	GOLGA8DP	Q0D2H9	430 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	FKBP15	Q5T1M5	1219 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	PKN3	Q6P5Z2	889 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370		Q6ZNB5	142 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	SFTPA1	Q8IWL2	248 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	P2RY11	Q96G91	374 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	BPIFA3	Q9BQP9	254 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	SLC4A5	Q9BY07	1137 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	PLCB1	Q9NQ66	1216 aa		18.24	■□□□□ 0.51
CTSB-223	ENST00000532370	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-223	ENST00000532370		E5RJQ4	531 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	FBXO21	O94952	628 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	ADH1C	P00326	375 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	ADH5	P11766	374 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	ZNF165	P49910	485 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	COG7	P83436	770 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	SATB1	Q01826	763 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	UBXN1	Q04323	297 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	PDCL	Q13371	301 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	SYCP1	Q15431	976 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	MEA1	Q16626	185 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	TMEM110	Q86TL2	294 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	FMNL3	Q8IVF7	1028 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	NAT16	Q8N8M0	369 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	ANKRD20A12P	Q8NF67	263 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	STK32A	Q8WU08	396 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	RNF139	Q8WU17	664 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	IRGQ	Q8WZA9	623 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	OTUB2	Q96DC9	234 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	STK33	Q9BYT3	514 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	IRF2BPL	Q9H1B7	796 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	SPHK2	Q9NRA0	654 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	ABCC13	Q9NSE7	274 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	LSM7	Q9UK45	103 aa	Known RBP	18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	STRIP2	Q9ULQ0	834 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	PCDHGC3	Q9UN70	934 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	PATJ	Q8NI35	1801 aa		18.23	■□□□□ 0.51
CTSB-223	ENST00000532370	KIF26A	Q9ULI4	1882 aa	Predicted RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	FAM170A	A1A519	330 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370		F8VZ95	297 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	PAPSS1	O43252	624 aa	Predicted RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	MSI1	O43347	362 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	LTF	P02788	710 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	FYN	P06241	537 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	CYP11B1	P15538	503 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	DRD1	P21728	446 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	CORO1A	P31146	461 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	KRT9	P35527	623 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	POLR2F	P61218	127 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	ANO4	Q32M45	955 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	TPGS1	Q6ZTW0	290 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	SPEM1	Q8N4L4	309 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	C1orf131	Q8NDD1	294 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	CPXM1	Q96SM3	734 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	NLRC4	Q9NPP4	1024 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	PRMT8	Q9NR22	394 aa	Predicted RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	AGO1	Q9UL18	857 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-223	ENST00000532370		R4GN57	208 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	CACNA1I	Q9P0X4	2223 aa		18.22	■□□□□ 0.51
CTSB-223	ENST00000532370	MYH10	P35580	1976 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	TRIM24	O15164	1050 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	RNF40	O75150	1001 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	ACADSB	P45954	432 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	GAD2	Q05329	585 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	IQCB1	Q15051	598 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	TAF5	Q15542	800 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	TAF3	Q5VWG9	929 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	MAMSTR	Q6ZN01	415 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	DENND1C	Q8IV53	801 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	SYNPO	Q8N3V7	929 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	BHMT	Q93088	406 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	PIWIL1	Q96J94	861 aa	Known RBP	18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	LHX5	Q9H2C1	402 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	OLA1	Q9NTK5	396 aa	Known RBP	18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	FBXO4	Q9UKT5	387 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	NAALADL1	Q9UQQ1	740 aa		18.21	■□□□□ 0.51
CTSB-223	ENST00000532370	SMTNL1	A8MU46	457 aa		18.2	■□□□□ 0.5
CTSB-223	ENST00000532370		K7EQS6	105 aa		18.2	■□□□□ 0.5

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