RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 SNX27Q96L92 541 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 GOLPH3Q9H4A6 298 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 ARHGAP28Q9P2N2 729 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 NID2Q14112 1375 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 A0A1B0GUA9 196 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 CST8O60676 142 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 HNRNPA1P09651 372 aaKnown RBP eCLIP12.02□□□□□ -0.48
CSRP1-215ENST00000532313 RCN2Q14257 317 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 PLCL1Q15111 1095 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 ELF2Q15723 593 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 FAM131BQ86XD5 332 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 HAUS8Q9BT25 410 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 EPB41L5Q9HCM4 733 aa12.02□□□□□ -0.48
CSRP1-215ENST00000532313 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.48
CSRP1-215ENST00000532313 QSOX1O00391 747 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 B4GALT5O43286 388 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 RBP3P10745 1247 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 SLC2A4P14672 509 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 SERPINB9P50453 376 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 ARSEP51690 589 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 ORC1Q13415 861 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 PDGFRLQ15198 375 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 TRADDQ15628 312 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 CCDC85BQ15834 202 aaPredicted RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 SERINC5Q86VE9 423 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 DUSP16Q9BY84 665 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 TEX33O43247 280 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 SPATA31C1P0DKV0 1188 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 TGM2P21980 687 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 FAM187BQ17R55 369 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 MMEL1Q495T6 779 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 ARMC12Q5T9G4 340 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 PRPF39Q86UA1 669 aaKnown RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 SEMA6BQ9H3T3 888 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 SFXN1Q9H9B4 322 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 IGLV3-22A0A075B6J6 115 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 IQCF3P0C7M6 154 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 FGFR1P11362 822 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 CST5P28325 142 aaPredicted RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 HTR7P34969 479 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 NR2C2P49116 596 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 ZNF200P98182 395 aaPredicted RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 ADCY2Q08462 1091 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 FUT2Q10981 343 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 GKAP1Q5VSY0 366 aaPredicted RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 ZNF438Q7Z4V0 828 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 DEFB106AQ8N104 65 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 MYCBPAPQ8TBZ2 947 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 TRMT61BQ9BVS5 477 aaKnown RBP12.02□□□□□ -0.49
CSRP1-215ENST00000532313 AIPL1Q9NZN9 384 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 USP18Q9UMW8 372 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 STARD13Q9Y3M8 1113 aa12.02□□□□□ -0.49
CSRP1-215ENST00000532313 A0A087WUV0 522 aaPredicted RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ERVK-10P10266 1014 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ALPPL2P10696 532 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 TMEM192Q8IY95 271 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 MAB21L3Q8N8X9 362 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 EXT2Q93063 718 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 AGAP3Q96P47 875 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CYLDQ9NQC7 956 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 RAB6BQ9NRW1 208 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CFAP97Q9P2B7 532 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 VPS51Q9UID3 782 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ERVW-1Q9UQF0 538 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 SLC27A5Q9Y2P5 690 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 HBS1LQ9Y450 684 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 FGF18O76093 207 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 SYF2O95926 243 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ASLP04424 464 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CCDC130P13994 396 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 MSH3P20585 1137 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 PPP1R13LQ8WUF5 828 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CLPBQ9H078 707 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 NSUN3Q9H649 340 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 F8VZ95 297 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 MAN2B1O00754 1011 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 RBM10P98175 930 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 DHX9Q08211 1270 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 HIF1AQ16665 826 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CCDC137Q6PK04 289 aaKnown RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 VSIG1Q86XK7 387 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ABHD8Q96I13 439 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 BCO2Q9BYV7 579 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 MIR1-1HGQ9H1L0 117 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ATP13A3Q9H7F0 1226 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 PCDHGB4Q9UN71 923 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ZNF865P0CJ78 1059 aaPredicted RBP12.01□□□□□ -0.49
CSRP1-215ENST00000532313 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 CSF2RAP15509 400 aa12.01□□□□□ -0.49
CSRP1-215ENST00000532313 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms