RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CACNG3O60359 315 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 ZNF217O75362 1048 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 TNNC2P02585 160 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 KRT10P13645 584 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 HLA-EP13747 358 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 PFKLP17858 780 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 GARTP22102 1010 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 EIF2S3P41091 472 aaKnown RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 MATKP42679 507 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 IL12RB1P42701 662 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 CASP4P49662 377 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 TPMTP51580 245 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 POU5F1Q01860 360 aaKnown RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 CUL4AQ13619 759 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 HNRNPDQ14103 355 aaKnown RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 GEN1Q17RS7 908 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 KIF19Q2TAC6 998 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 WDR72Q3MJ13 1102 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 WDR45BQ5MNZ6 344 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 SYCP2LQ5T4T6 812 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 DPH6Q7L8W6 267 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 TRMT11Q7Z4G4 463 aaKnown RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 RABEPKQ7Z6M1 372 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 GLRX5Q86SX6 157 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 DDX42Q86XP3 938 aaKnown RBP eCLIP9.49□□□□□ -0.89
USF1-210ENST00000531842 ZNF366Q8N895 744 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 B3GALNT2Q8NCR0 500 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 SCFD1Q8WVM8 642 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 DNASE2BQ8WZ79 361 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 SLC39A7Q92504 469 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 CCDC127Q96BQ5 260 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 HVCN1Q96D96 273 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 SMOQ99835 787 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 MED10Q9BTT4 135 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 KLF16Q9BXK1 252 aaPredicted RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 FAM124BQ9H5Z6 455 aaPredicted RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 C6orf106Q9H6K1 298 aaPredicted RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 UPF2Q9HAU5 1272 aaKnown RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 NMUR1Q9HB89 426 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.89
USF1-210ENST00000531842 KRT82Q9NSB4 513 aa9.49□□□□□ -0.89
USF1-210ENST00000531842 USP36Q9P275 1121 aaKnown RBP9.49□□□□□ -0.89
USF1-210ENST00000531842 TDRD6O60522 2096 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 BCAT2O15382 392 aaPredicted RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 CYP26A1O43174 497 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 SLC26A4O43511 780 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 TLR5O60602 858 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 DKK1O94907 266 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 LDHAP00338 332 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 HMBSP08397 361 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 ZDHHC11BP0C7U3 371 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 PLA2G2AP14555 144 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 GNSP15586 552 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 SCP2P22307 547 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 PRKCHP24723 683 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 LONP1P36776 959 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 DGKGP49619 791 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 COPAP53621 1224 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 CEBPZQ03701 1054 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 MAPRE1Q15691 268 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 SDE2Q6IQ49 451 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 PLEKHO2Q8TD55 490 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 ELOVL4Q9GZR5 314 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 NACA2Q9H009 215 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 ITM2CQ9NQX7 267 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 FAM49BQ9NUQ9 324 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 PANK4Q9NVE7 773 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 HSPBP1Q9NZL4 362 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 SUSD2Q9UGT4 822 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
USF1-210ENST00000531842 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
USF1-210ENST00000531842 PIEZO2Q9H5I5 2752 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 NYNRINQ9P2P1 1898 aaKnown RBP9.47□□□□□ -0.89
USF1-210ENST00000531842 A0A087WV48 116 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 ZNF233A6NK53 670 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 H0Y8X5 98 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 TACC1O75410 805 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 AP1G2O75843 785 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 RTN3O95197 1032 aaPredicted RBP9.47□□□□□ -0.89
USF1-210ENST00000531842 BMP15O95972 392 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 KLKB1P03952 638 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 GAP43P17677 238 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 TNNI1P19237 187 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 ACSL1P33121 698 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 ABCD1P33897 745 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 ABCG1P45844 678 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 PPP3CCP48454 512 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 CYP2J2P51589 502 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 MAP3K7CLP57077 242 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 SEMG2Q02383 582 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 C19orf57Q0VDD7 668 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 DNAJC3Q13217 504 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 RRAGBQ5VZM2 374 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 TMEM215Q68D42 235 aa9.47□□□□□ -0.89
USF1-210ENST00000531842 PCSK4Q6UW60 755 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms