RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-210	ENST00000531768	SNUPN	O95149	360 aa	Known RBP	4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	RASAL1	O95294	804 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	IL33	O95760	270 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	PLG	P00747	810 aa	Predicted RBP	4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	RPS6KB1	P23443	525 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	GAS1	P54826	345 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	SLC12A2	P55011	1212 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	FGL2	Q14314	439 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	NUGGC	Q68CJ6	796 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	TFAP2D	Q7Z6R9	452 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	SEMA5B	Q9P283	1151 aa		4.06	□□□□□ -1.76
RSF1-210	ENST00000531768	LINC01565	O15544	149 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	RGS10	O43665	173 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	PRAMEF2	O60811	474 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	HGF	P14210	728 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	AKAP5	P24588	427 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	ADRA1D	P25100	572 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	ENTPD1	P49961	510 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	EGR4	Q05215	589 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	SLC13A2	Q13183	592 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	FAM50A	Q14320	339 aa	Known RBP	4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	CACHD1	Q5VU97	1274 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	ZDHHC24	Q6UX98	284 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	NPNT	Q6UXI9	565 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	KCTD20	Q7Z5Y7	419 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	CHPF	Q8IZ52	775 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	METTL25	Q8N6Q8	603 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	OR6B3	Q8NGW1	331 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	OIT3	Q8WWZ8	545 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	MAP3K14	Q99558	947 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	SPEF1	Q9Y4P9	236 aa		4.05	□□□□□ -1.76
RSF1-210	ENST00000531768	SPATA31A1	Q5TZJ5	1347 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	AGPS	O00116	658 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	MLH1	P40692	756 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	GATM	P50440	423 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	PGD	P52209	483 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	TXNL4A	P83876	142 aa	Known RBP	4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	RAB32	Q13637	225 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	INSC	Q1MX18	579 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	NADSYN1	Q6IA69	706 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	RBM44	Q6ZP01	1051 aa	Known RBP	4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	TRAPPC11	Q7Z392	1133 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	PIGK	Q92643	395 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	HPS3	Q969F9	1004 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	HSPBAP1	Q96EW2	488 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	P2RY11	Q96G91	374 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	PPP1R9B	Q96SB3	815 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	SMURF2	Q9HAU4	748 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	ANAPC4	Q9UJX5	808 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	AGO2	Q9UKV8	859 aa	Known RBP	4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	RIMKLB	Q9ULI2	386 aa		4.04	□□□□□ -1.76
RSF1-210	ENST00000531768	C16orf96	A6NNT2	1141 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	CD19	P15391	556 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	JAK3	P52333	1124 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	ST3GAL2	Q16842	350 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	GRAMD1C	Q8IYS0	662 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	FAM71D	Q8N9W8	422 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	SMAD5	Q99717	465 aa	Known RBP	4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	SF3B5	Q9BWJ5	86 aa	Known RBP	4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	SPC25	Q9HBM1	224 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	MOV10	Q9HCE1	1003 aa	Known RBP	4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	FZD3	Q9NPG1	666 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	PLSCR4	Q9NRQ2	329 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	THSD1	Q9NS62	852 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	WNT16	Q9UBV4	365 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	ICAM5	Q9UMF0	924 aa		4.03	□□□□□ -1.76
RSF1-210	ENST00000531768	LOC102723971	A0A1B0GUV8	181 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	SERINC4	A6NH21	518 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	RRP9	O43818	475 aa	Known RBP	4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	TBC1D4	O60343	1298 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	ZNF432	O94892	652 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	PAPSS2	O95340	614 aa	Predicted RBP	4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	ACAA1	P09110	424 aa	Predicted RBP	4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	PARP1	P09874	1014 aa	Known RBP	4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	WDR5	P61964	334 aa	Known RBP	4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	ATAT1	Q5SQI0	421 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	SLC39A5	Q6ZMH5	540 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	OR56A3	Q8NH54	315 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	ELP5	Q8TE02	316 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	C1GALT1C1	Q96EU7	318 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	VPS50	Q96JG6	964 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	ASPSCR1	Q9BZE9	553 aa		4.02	□□□□□ -1.77
RSF1-210	ENST00000531768	ALG1L2	C9J202	215 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768		H7C4K7	107 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	PODXL	O00592	558 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	PRPF4	O43172	522 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	CCP110	O43303	1012 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	CA12	O43570	354 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	UGDH	O60701	494 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	MBP	P02686	304 aa	Predicted RBP	4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	ST6GAL1	P15907	406 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	TFEB	P19484	476 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	GALNS	P34059	522 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	PTDSS1	P48651	473 aa	Known RBP	4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	DSCR9	P59020	149 aa		4.01	□□□□□ -1.77
RSF1-210	ENST00000531768	MTA1	Q13330	715 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms