RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CALR3Q96L12 384 aaKnown RBP19.89■□□□□ 0.77
SMPD1-205ENST00000531303 ATXN3LQ9H3M9 355 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 FAM204AQ9H8W3 233 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMPD1-205ENST00000531303 SFMBT1Q9UHJ3 866 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 STAP1Q9ULZ2 295 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 OBSL1O75147 1896 aa19.89■□□□□ 0.77
SMPD1-205ENST00000531303 DENND4CQ5VZ89 1909 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 NOTCH4Q99466 2003 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 A0A1W2PRU2 124 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 M0QYT0 321 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 DPYSL4O14531 572 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 SPOPO43791 374 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 RHOP08100 348 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 DNA2P51530 1060 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 CYP4F8P98187 520 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 EFEMP1Q12805 493 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 ADAM15Q13444 863 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 SLC25A52Q3SY17 297 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 PABPC1LQ4VXU2 614 aaKnown RBP19.88■□□□□ 0.77
SMPD1-205ENST00000531303 CC2D1AQ6P1N0 951 aaPredicted RBP19.88■□□□□ 0.77
SMPD1-205ENST00000531303 GAREM2Q75VX8 874 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 PDZD4Q76G19 769 aaPredicted RBP19.88■□□□□ 0.77
SMPD1-205ENST00000531303 PEX26Q7Z412 305 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 TAC4Q86UU9 113 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 SYCE1Q8N0S2 351 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 TRIM58Q8NG06 486 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 DQX1Q8TE96 717 aaKnown RBP19.88■□□□□ 0.77
SMPD1-205ENST00000531303 MYLIPQ8WY64 445 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 WDR24Q96S15 920 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 NPY6RQ99463 290 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 ADAM33Q9BZ11 813 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 NACA2Q9H009 215 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 TRPC7Q9HCX4 862 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 CLDND1Q9NY35 253 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 CLIC5Q9NZA1 410 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 C2orf16Q68DN1 1984 aa19.88■□□□□ 0.77
SMPD1-205ENST00000531303 C2orf78A6NCI8 922 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 NRG2O14511 850 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-205ENST00000531303 NCK2O43639 380 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 TLR5O60602 858 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 RNF8O76064 485 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 TRUB2O95900 331 aaKnown RBP19.87■□□□□ 0.77
SMPD1-205ENST00000531303 DESP17661 470 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 GJC1P36383 396 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 PTPN9P43378 593 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 ATXN1P54253 815 aaKnown RBP19.87■□□□□ 0.77
SMPD1-205ENST00000531303 HABP4Q5JVS0 413 aaKnown RBP19.87■□□□□ 0.77
SMPD1-205ENST00000531303 HECTD3Q5T447 861 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 ANKRD54Q6NXT1 300 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 SCYL2Q6P3W7 929 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-205ENST00000531303 TCEAL4Q96EI5 215 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 GCNAQ96QF7 691 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 DDIT4Q9NX09 232 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 CALCOCO1Q9P1Z2 691 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 RASAL2Q9UJF2 1139 aa19.87■□□□□ 0.77
SMPD1-205ENST00000531303 PACSIN2Q9UNF0 486 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-205ENST00000531303 MSI1O43347 362 aaKnown RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 TCF4P15884 667 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 POU3F3P20264 500 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CDC25CP30307 473 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CCR2P41597 374 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 PPP3CCP48454 512 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 DEUP1Q05D60 604 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 OTUD1Q5VV17 481 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 TXNDC8Q6A555 127 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 SYT10Q6XYQ8 523 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 TMEM184AQ6ZMB5 413 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 NYAP1Q6ZVC0 841 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 BEND5Q7L4P6 421 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 SLFN11Q7Z7L1 901 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 MIB1Q86YT6 1006 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 ARFGAP1Q8N6T3 406 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 MRPS31Q92665 395 aaKnown RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 PCSK1NQ9UHG2 260 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 LCMT1Q9UIC8 334 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CDH22Q9UJ99 828 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 AMFRQ9UKV5 643 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 ENC1O14682 589 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 MAN1A1P33908 653 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 TAS2R40P59535 323 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 DLX2Q07687 328 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CCDC85BQ15834 202 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 SLC5A9Q2M3M2 681 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 SNX30Q5VWJ9 437 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 SYCE2Q6PIF2 218 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 NT5DC3Q86UY8 548 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 NIPA2Q8N8Q9 360 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CMASQ8NFW8 434 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 SHKBP1Q8TBC3 707 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CYP2S1Q96SQ9 504 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 CDX2Q99626 313 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMPD1-205ENST00000531303 DNAI1Q9UI46 699 aa19.86■□□□□ 0.77
SMPD1-205ENST00000531303 BRWD1Q9NSI6 2320 aa19.85■□□□□ 0.77
SMPD1-205ENST00000531303 COCHO43405 550 aa19.85■□□□□ 0.77
SMPD1-205ENST00000531303 LRCH4O75427 683 aa19.85■□□□□ 0.77
SMPD1-205ENST00000531303 HMBSP08397 361 aa19.85■□□□□ 0.77
SMPD1-205ENST00000531303 MIPP30301 263 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms