RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PTPRDP23468 1912 aa10.3□□□□□ -0.76
CTNND1-228ENST00000531007 VWA8A3KMH1 1905 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 PATJQ8NI35 1801 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SRGAP2O75044 1071 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 TJP3O95049 919 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 TRUB2O95900 331 aaKnown RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 LTFP02788 710 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 ATF2P15336 505 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CYP2F1P24903 491 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CXCR5P32302 372 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 GBP1P32455 592 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 FLT3P36888 993 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 BMPR1AP36894 532 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SSR1P43307 286 aaKnown RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 PPP3CCP48454 512 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SLC5A3P53794 718 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 EPHB4P54760 987 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 RNASE9P60153 205 aaKnown RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 ROR1Q01973 937 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 OGDHQ02218 1023 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SLC25A11Q02978 314 aaKnown RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 LONRF2Q1L5Z9 754 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 TFDP3Q5H9I0 405 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 LLGL2Q6P1M3 1020 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SND1Q7KZF4 910 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 RSRC2Q7L4I2 434 aaKnown RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 BNIPLQ7Z465 357 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 TADA2BQ86TJ2 420 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SCN4BQ8IWT1 228 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 VPS52Q8N1B4 723 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 MMGT1Q8N4V1 131 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 EMC1Q8N766 993 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 PDZD8Q8NEN9 1154 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CMASQ8NFW8 434 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 ALG3Q92685 438 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 KRT35Q92764 455 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 FAM149B1Q96BN6 582 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CAPZA3Q96KX2 299 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 OLA1Q9NTK5 396 aaKnown RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CLIC5Q9NZA1 410 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 CXXC1Q9P0U4 656 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 FEZ2Q9UHY8 353 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-228ENST00000531007 USTQ9Y2C2 406 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 NLRC5Q86WI3 1866 aa10.29□□□□□ -0.76
CTNND1-228ENST00000531007 TARSL2A2RTX5 802 aaKnown RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 H0YGN5 161 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 KRIT1O00522 736 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 FSCN2O14926 492 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF185O15231 689 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ZNF189O75820 626 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 FGGP02679 453 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 OR4Q2P0C623 313 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 LINC00271P0C7V0 271 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 CSH1P0DML2 217 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 CSH2P0DML3 217 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 PYGMP11217 842 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 YWHAQP27348 245 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 MIPP30301 263 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ELF1P32519 619 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 CTHP32929 405 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 OR1D2P34982 312 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 RDXP35241 583 aaKnown RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 PBX3P40426 434 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ALDH1A3P47895 512 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 DNA2P51530 1060 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 NNTQ13423 1086 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 SMC1AQ14683 1233 aaKnown RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 MGAT5BQ3V5L5 792 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 DCAF6Q58WW2 860 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 DCAF12L1Q5VU92 463 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 BSPRYQ5W0U4 402 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 BTBD8Q5XKL5 378 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 TAS1R1Q7RTX1 841 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 MAATS1Q7Z4T9 603 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 SLC13A5Q86YT5 568 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 TCEAL8Q8IYN2 117 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 DEFB106AQ8N104 65 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 GPR161Q8N6U8 529 aaKnown RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 FAM172AQ8WUF8 416 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 TSC1Q92574 1164 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 NTAN1Q96AB6 310 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 CFAP57Q96MR6 1250 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 PSMB7Q99436 277 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 NPY6RQ99463 290 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 CLSTN3Q9BQT9 956 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 TTLL2Q9BWV7 592 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 VN1R3Q9BXE9 311 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 EMILIN2Q9BXX0 1053 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ZBP1Q9H171 429 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
CTNND1-228ENST00000531007 NGRNQ9NPE2 291 aaKnown RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 RCOR3Q9P2K3 495 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 UXTQ9UBK9 157 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-228ENST00000531007 ZMYND8Q9ULU4 1186 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms