RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 KRT7P08729 469 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 PPP3CCP48454 512 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 PGFP49763 221 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 SULT1E1P49888 294 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 HDAC4P56524 1084 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 RWDD2BP57060 319 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 SLC25A11Q02978 314 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 TAF12Q16514 161 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 CDO1Q16878 200 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 BOLA3Q53S33 107 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 MSANTD2Q6P1R3 559 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 SLC7A14Q8TBB6 771 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 EDEM1Q92611 657 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 ALG3Q92685 438 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 CARD9Q9H257 536 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 L2HGDHQ9H9P8 463 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 RNF14Q9UBS8 474 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 DPP7Q9UHL4 492 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 CHD9Q3L8U1 2897 aa12.53□□□□□ -0.4
UBASH3B-207ENST00000530917 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 M0QYT0 321 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 SRGAP2O75044 1071 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 IGLV3-25P01717 112 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 LRG1P02750 347 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 RALAP11233 206 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 RARGP13631 454 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 TCF4P15884 667 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 IL1R2P27930 398 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 CXCR5P32302 372 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 GBP1P32455 592 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 MARCKSL1P49006 195 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 DNA2P51530 1060 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 DEUP1Q05D60 604 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 EIF4EBP2Q13542 120 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 LRIT3Q3SXY7 679 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 RAB6CQ53S08 254 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 OTUD1Q5VV17 481 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 CREG2Q8IUH2 290 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 CMASQ8NFW8 434 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 EXD1Q8NHP7 514 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 DQX1Q8TE96 717 aaKnown RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 GDPD5Q8WTR4 605 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 COG1Q8WTW3 980 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 TEKT4Q8WW24 435 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 MRPL38Q96DV4 380 aaKnown RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 PSMB7Q99436 277 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 RAB6CQ9H0N0 254 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 TLE6Q9H808 572 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 CALCOCO1Q9P1Z2 691 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 MRFAP1Q9Y605 127 aa12.52□□□□□ -0.41
UBASH3B-207ENST00000530917 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 PER2O15055 1255 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ZNF185O15231 689 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ZMYND10O75800 440 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ZRANB2O95218 330 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 PYGMP11217 842 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 EPCAMP16422 314 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 HOXA9P31269 272 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 RDXP35241 583 aaKnown RBP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 CXCR3P49682 368 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 DUSP6Q16828 381 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 WHAMMP3Q1A5X7 153 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ATP13A4Q4VNC1 1196 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 PABPC1LQ4VXU2 614 aaKnown RBP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ERMARDQ5T6L9 678 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 DCAF12L1Q5VU92 463 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 SCYL2Q6P3W7 929 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ELMSAN1Q6PJG2 1045 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 CYP4V2Q6ZWL3 525 aaPredicted RBP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ELMOD1Q8N336 334 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 RASGEF1CQ8N431 466 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ACTRT1Q8TDG2 376 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 PEBP4Q96S96 227 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 LRRC3Q9BY71 257 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 SMOC2Q9H3U7 446 aa12.51□□□□□ -0.41
UBASH3B-207ENST00000530917 ZWILCHQ9H900 591 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms