RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 HSF2BPO75031 334 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 GRAP2O75791 330 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 FECHP22830 423 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 TSR1Q2NL82 804 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 EFHC1Q5JVL4 640 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 SYPL2Q5VXT5 272 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 RSRC2Q7L4I2 434 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 VPS36Q86VN1 386 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 MCOLN2Q8IZK6 566 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 SLC44A3Q8N4M1 653 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 SH3RF2Q8TEC5 729 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 NACA2Q9H009 215 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 ISCUQ9H1K1 167 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 POPDC2Q9HBU9 364 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 GOLGA8SH3BPF8 625 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 LEFTY2O00292 366 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 DAB1O75553 588 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 CALB1P05937 261 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 NCAM1P13591 858 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 EFEMP1Q12805 493 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 FAM102AQ5T9C2 384 aaPredicted RBP22.3■■□□□ 1.16
CAPN1-220ENST00000530567 PHLDB2Q86SQ0 1253 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 TADA2BQ86TJ2 420 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 MFSD6LQ8IWD5 586 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 GOLGA1Q92805 767 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 WBP2Q969T9 261 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 E2F7Q96AV8 911 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 PANX2Q96RD6 677 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 GKN1Q9NS71 199 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 OLA1Q9NTK5 396 aaKnown RBP22.3■■□□□ 1.16
CAPN1-220ENST00000530567 MARCH2Q9P0N8 246 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 RASAL2Q9UJF2 1139 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 TMEM59LQ9UK28 342 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 STRIP2Q9ULQ0 834 aa22.3■■□□□ 1.16
CAPN1-220ENST00000530567 RTN2O75298 545 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 FTLP02792 175 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-220ENST00000530567 PITX1P78337 314 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-220ENST00000530567 FCHO2Q0JRZ9 810 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 GRM2Q14416 872 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 TRNP1Q6NT89 227 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 PPP1R2P3Q6NXS1 205 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 MIB1Q86YT6 1006 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 DEFB106AQ8N104 65 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 BPIFB1Q8TDL5 484 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 DQX1Q8TE96 717 aaKnown RBP22.29■■□□□ 1.16
CAPN1-220ENST00000530567 RNF139Q8WU17 664 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 DEPDC1BQ8WUY9 529 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 TRIM62Q9BVG3 475 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 SMOC2Q9H3U7 446 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 NHEJ1Q9H9Q4 299 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-220ENST00000530567 WDR35Q9P2L0 1181 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 SFMBT1Q9UHJ3 866 aa22.29■■□□□ 1.16
CAPN1-220ENST00000530567 DPYSL4O14531 572 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 GREM1O60565 184 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 GJB6O95452 261 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 RRM1P23921 792 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 GFPT1Q06210 699 aaPredicted RBP22.28■■□□□ 1.16
CAPN1-220ENST00000530567 SLC18A3Q16572 532 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 C3orf20Q8ND61 904 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 ASIC4Q96FT7 647 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 VCPIP1Q96JH7 1222 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 METTL5Q9NRN9 209 aaKnown RBP22.28■■□□□ 1.16
CAPN1-220ENST00000530567 CFAP97Q9P2B7 532 aa22.28■■□□□ 1.16
CAPN1-220ENST00000530567 MSI1O43347 362 aaKnown RBP22.27■■□□□ 1.16
CAPN1-220ENST00000530567 IGLV3-25P01717 112 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 PSMC3P17980 439 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 FLT3P36888 993 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 MRE11P49959 708 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 TDGQ13569 410 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 MTF1Q14872 753 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 DCAF6Q58WW2 860 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 OTUD1Q5VV17 481 aaPredicted RBP22.27■■□□□ 1.16
CAPN1-220ENST00000530567 ALKBH5Q6P6C2 394 aaKnown RBP22.27■■□□□ 1.16
CAPN1-220ENST00000530567 TAC4Q86UU9 113 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 ADAM33Q9BZ11 813 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 MUTYHQ9UIF7 546 aa22.27■■□□□ 1.16
CAPN1-220ENST00000530567 SLC12A8A0AV02 714 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 CAPN9O14815 690 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 NARSO43776 548 aaKnown RBP22.26■■□□□ 1.15
CAPN1-220ENST00000530567 STC2O76061 302 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 PPP1R15BQ5SWA1 713 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 ARCQ7LC44 396 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 DDX42Q86XP3 938 aaKnown RBP eCLIP22.26■■□□□ 1.15
CAPN1-220ENST00000530567 JOSD2Q8TAC2 188 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 ADAM32Q8TC27 787 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 SORCS3Q9UPU3 1222 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 COL4A2P08572 1712 aa22.26■■□□□ 1.15
CAPN1-220ENST00000530567 MUC3AQ02505 3323 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 ARNTLO00327 626 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 SCAMP3O14828 347 aaKnown RBP22.25■■□□□ 1.15
CAPN1-220ENST00000530567 ATMINO43313 823 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-220ENST00000530567 IGLV3-27P01718 113 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 IRF1P10914 325 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 MATKP42679 507 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 RNASE9P60153 205 aaKnown RBP22.25■■□□□ 1.15
CAPN1-220ENST00000530567 EIF4EBP2Q13542 120 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-220ENST00000530567 CCDC122Q5T0U0 273 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 TMEM139Q8IV31 216 aa22.25■■□□□ 1.15
CAPN1-220ENST00000530567 EMC1Q8N766 993 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms