RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 RARGP13631 454 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 CMA1P23946 247 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 NTSR1P30989 418 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 RPL6Q02878 288 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 PPP3CAQ08209 521 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 INCA1Q0VD86 236 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 PREPLQ4J6C6 727 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 KIAA1211LQ6NV74 962 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 TRMT11Q7Z4G4 463 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 SYT12Q8IV01 421 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 CD93Q9NPY3 652 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 CYLDQ9NQC7 956 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 PLK2Q9NYY3 685 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 EVLQ9UI08 416 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 LSM7Q9UK45 103 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 TRAF3IP3Q9Y228 551 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 RAD54BQ9Y620 910 aa21.87■■□□□ 1.09
TSPAN4-219ENST00000530404 A0A1W2PQF6 199 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 ENGP17813 658 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 NR2F2P24468 414 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 BYSLQ13895 437 aaKnown RBP21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 ZNF394Q53GI3 561 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 NUDT18Q6ZVK8 323 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 P2RY11Q96G91 374 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 SPATA32Q96LK8 384 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 XPO6Q96QU8 1125 aaKnown RBP21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 NT5C1AQ9BXI3 368 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 IMPG2Q9BZV3 1241 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 SLC6A17Q9H1V8 727 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 PILRBQ9UKJ0 227 aa21.86■■□□□ 1.09
TSPAN4-219ENST00000530404 C1QTNF9BB2RNN3 333 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 CACNG3O60359 315 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 CFIP05156 583 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 C1QTNF9P0C862 333 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 NDUFV2P19404 249 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 SYKP43405 635 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 NDUFA8P51970 172 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 GOLGA8FQ08AF8 430 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 GOLGA8DPQ0D2H9 430 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 C10orf120Q5SQS8 335 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 PPP1R26Q5T8A7 1209 aaPredicted RBP21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 FAM186BQ8IYM0 893 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 CHPFQ8IZ52 775 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 KCNV2Q8TDN2 545 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 USP25Q9UHP3 1055 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 NAGPAQ9UK23 515 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 CYP8B1Q9UNU6 501 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 STARD13Q9Y3M8 1113 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 PCDHA5Q9Y5H7 936 aa21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 TP53BP1Q12888 1972 aaPredicted RBP21.85■■□□□ 1.09
TSPAN4-219ENST00000530404 IGHV1OR15-9A0A0B4J2B8 117 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 AP5Z1O43299 807 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 CILPO75339 1184 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 DGKGP49619 791 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 LMAN2Q12907 356 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 SLC23A3Q6PIS1 610 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 SCD5Q86SK9 330 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 IPO4Q8TEX9 1081 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 NIF3L1Q9GZT8 377 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 CACNA2D2Q9NY47 1150 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 MARK1Q9P0L2 795 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 DNMT3LQ9UJW3 386 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 IGF2RP11717 2491 aa21.84■■□□□ 1.09
TSPAN4-219ENST00000530404 WASH3PC4AMC7 463 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 MAPK13O15264 365 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 STC2O76061 302 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 RHOBTB3O94955 611 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 HMBSP08397 361 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 KRT13P13646 458 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 CEACAM1P13688 526 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 TRIM21P19474 475 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 CSRP1P21291 193 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 KIF11P52732 1056 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 DPYDQ12882 1025 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 Q6ZNB5 142 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 INTS8Q75QN2 995 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 GTPBP2Q9BX10 602 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 CYP3A43Q9HB55 503 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 CD248Q9HCU0 757 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 WDR35Q9P2L0 1181 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 RASAL2Q9UJF2 1139 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 ZDHHC9Q9Y397 364 aa21.83■■□□□ 1.09
TSPAN4-219ENST00000530404 NUMA1Q14980 2115 aa21.83■■□□□ 1.08
TSPAN4-219ENST00000530404 TMEM131Q92545 1883 aa21.83■■□□□ 1.08
TSPAN4-219ENST00000530404 MYL1P05976 194 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 CISD3P0C7P0 127 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 PLA2G4AP47712 749 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 ZNF33AQ06730 810 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 NFIL3Q16649 462 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 SPDYCQ5MJ68 293 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 PEAR1Q5VY43 1037 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 SDE2Q6IQ49 451 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 SLC41A1Q8IVJ1 513 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 OR2I1PQ8NGU4 316 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 SEMA4DQ92854 862 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 CCDC47Q96A33 483 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 EEF2KMTQ96G04 330 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 DUSP16Q9BY84 665 aa21.82■■□□□ 1.08
TSPAN4-219ENST00000530404 PNPLA8Q9NP80 782 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms