RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 GREM1O60565 184 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 ADAM23O75077 832 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 TYRP14679 529 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 BCKDHBP21953 392 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 DHPSP49366 369 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-204ENST00000530395 SLC8A3P57103 927 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 BECN1Q14457 450 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 DCAF17Q5H9S7 520 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-204ENST00000530395 ZNF658Q5TYW1 1059 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-204ENST00000530395 TCEAL6Q6IPX3 200 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 FMR1NBQ8N0W7 255 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-204ENST00000530395 PGBD3Q8N328 593 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 ZNF276Q8N554 614 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 TCEAL3Q969E4 200 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 TMEM176AQ96HP8 235 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 GSDMAQ96QA5 445 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 EDEM2Q9BV94 578 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 GTPBP4Q9BZE4 634 aaKnown RBP21.99■■□□□ 1.11
SMPD1-204ENST00000530395 CLIC5Q9NZA1 410 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 MARK1Q9P0L2 795 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 HOOK1Q9UJC3 728 aaKnown RBP21.99■■□□□ 1.11
SMPD1-204ENST00000530395 EPG5Q9HCE0 2579 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 CHD8Q9HCK8 2581 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 MDM4O15151 490 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 MAP3K13O43283 966 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 CACNG3O60359 315 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 P2RY2P41231 377 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 PRCPP42785 496 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 COBLL1Q53SF7 1204 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 TPGS1Q6ZTW0 290 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 LPCAT2Q7L5N7 544 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 ARHGAP18Q8N392 663 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 NUDT5Q9UKK9 219 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 STARD13Q9Y3M8 1113 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 USP3Q9Y6I4 520 aa21.98■■□□□ 1.11
SMPD1-204ENST00000530395 TNRC6BQ9UPQ9 1833 aaKnown RBP21.97■■□□□ 1.11
SMPD1-204ENST00000530395 KHNYNO15037 678 aaKnown RBP21.97■■□□□ 1.11
SMPD1-204ENST00000530395 HOXB2P14652 356 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 RAD23BP54727 409 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 FKBP3Q00688 224 aaKnown RBP21.97■■□□□ 1.11
SMPD1-204ENST00000530395 SDE2Q6IQ49 451 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 SCD5Q86SK9 330 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 MIB1Q86YT6 1006 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 SLC4A11Q8NBS3 891 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 RLN3Q8WXF3 142 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 SMARCE1Q969G3 411 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 ARID3AQ99856 593 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 UBXN6Q9BZV1 441 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 ZNF510Q9Y2H8 683 aa21.97■■□□□ 1.11
SMPD1-204ENST00000530395 ZBTB24O43167 697 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-204ENST00000530395 NTSR1P30989 418 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 YWHAEP62258 255 aaKnown RBP21.96■■□□□ 1.11
SMPD1-204ENST00000530395 NUCB2P80303 420 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 COG7P83436 770 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 LRRC63Q05C16 580 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 ARHGAP17Q68EM7 881 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 Q6ZNB5 142 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 CNTNAP3BQ96NU0 1288 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 CNTNAP3Q9BZ76 1288 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 RASAL2Q9UJF2 1139 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 CEP192Q8TEP8 1941 aa21.96■■□□□ 1.11
SMPD1-204ENST00000530395 LNP1A1A4G5 178 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 TM4SF5O14894 197 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 TRIM24O15164 1050 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 STC2O76061 302 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 DPP6P42658 865 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 DGKGP49619 791 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 STIM1Q13586 685 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 CBWD6Q4V339 395 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 CBWD3Q5JTY5 395 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 CBWD5Q5RIA9 395 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 PIGZQ86VD9 579 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 ZC3H3Q8IXZ2 948 aaKnown RBP21.95■■□□□ 1.1
SMPD1-204ENST00000530395 CHPFQ8IZ52 775 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 ANKRD52Q8NB46 1076 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 PIGKQ92643 395 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 TATDN2Q93075 761 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 DCLK3Q9C098 648 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 ARMCX3Q9UH62 379 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-204ENST00000530395 STRIP2Q9ULQ0 834 aa21.95■■□□□ 1.1
SMPD1-204ENST00000530395 WASP42768 502 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 EFEMP1Q12805 493 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 CUL2Q13617 745 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 MAP7D1Q3KQU3 841 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 SPDYCQ5MJ68 293 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 DAB2IPQ5VWQ8 1189 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 EGFLAMQ63HQ2 1017 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 ANKRD40Q6AI12 368 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 RSRC2Q7L4I2 434 aaKnown RBP21.94■■□□□ 1.1
SMPD1-204ENST00000530395 LSM14BQ9BX40 385 aaKnown RBP21.94■■□□□ 1.1
SMPD1-204ENST00000530395 COQ4Q9Y3A0 265 aa21.94■■□□□ 1.1
SMPD1-204ENST00000530395 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 C4orf47A7E2U8 309 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 CHKAP35790 457 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 BCAT1P54687 386 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 GOLGA7BQ2TAP0 167 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 RAB41Q5JT25 222 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 TMEFF1Q8IYR6 380 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 ENGASEQ8NFI3 743 aa21.93■■□□□ 1.1
SMPD1-204ENST00000530395 SPATA20Q8TB22 786 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms