RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.78□□□□□ -0.36
SCN3B-206ENST00000530277 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TMEM59LQ9UK28 342 aa12.78□□□□□ -0.36
SCN3B-206ENST00000530277 TCRBV7S3A2A0A539 114 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 TCRBV9S1A1TA0A576 114 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 C3orf70A6NLC5 250 aaPredicted RBP12.77□□□□□ -0.36
SCN3B-206ENST00000530277 PDHXO00330 501 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 SEC24DO94855 1032 aaPredicted RBP12.77□□□□□ -0.36
SCN3B-206ENST00000530277 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.36
SCN3B-206ENST00000530277 ARIH2O95376 493 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 CPB1P15086 417 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 MMP14P50281 582 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 C1orf220Q5T0J3 134 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 ARMC3Q5W041 872 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 ICA1LQ8NDH6 482 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 BORCS6Q96GS4 357 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 ELMO2Q96JJ3 720 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.36
SCN3B-206ENST00000530277 TBC1D10AQ9BXI6 508 aa12.77□□□□□ -0.36
SCN3B-206ENST00000530277 PHGDHO43175 533 aaKnown RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 LYPLA1O75608 230 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 STX1BP61266 288 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 OTOAQ7RTW8 1153 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 TRABD2AQ86V40 505 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 ALYREFQ86V81 257 aaKnown RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 ECHDC2Q86YB7 292 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 DDIASQ8IXT1 998 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 RFWD2Q8NHY2 731 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 LPPQ93052 612 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 RMDN1Q96DB5 314 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 GAD1Q99259 594 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF518BQ9C0D4 1074 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 ELOVL4Q9GZR5 314 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 WDCPQ9H6R7 721 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 SIGLEC16A6NMB1 481 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 APOC4-APOC2K7ER74 178 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 RNF103O00237 685 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 C2CD2LO14523 706 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 APOC2P02655 101 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 UNGP13051 313 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 FOXN2P32314 431 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 OGDHQ02218 1023 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 KPNB1Q14974 876 aaKnown RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 MTFR1Q15390 333 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 CELF3Q5SZQ8 465 aaKnown RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 CCDC117Q8IWD4 279 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 RIBC1Q8N443 379 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 EFHBQ8N7U6 833 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 EMID1Q96A84 441 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 VPS39Q96JC1 886 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 MARK4Q96L34 752 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 FOXP3Q9BZS1 431 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF395Q9H8N7 513 aaPredicted RBP12.77□□□□□ -0.37
SCN3B-206ENST00000530277 TUBGCP4Q9UGJ1 667 aa12.77□□□□□ -0.37
SCN3B-206ENST00000530277 MYO18AQ92614 2054 aaKnown RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 TGFB3P10600 412 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 NCALDP61601 193 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 PHF13Q86YI8 300 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 TEX9Q8N6V9 391 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 GABPB2Q8TAK5 448 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 ZFP42Q96MM3 310 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 GRID1Q9ULK0 1009 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 LYPLA2O95372 231 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 ZFXP17010 805 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 TAC1P20366 129 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 KCNA3P22001 575 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 IL1R2P27930 398 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 NUDT2P50583 147 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 TSPY1Q01534 308 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 DHX33Q9H6R0 707 aaKnown RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 SP110Q9HB58 689 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 NFKBIEO00221 500 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 PSMB4P28070 264 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 ECHS1P30084 290 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 THPOP40225 353 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 OR1G1P47890 313 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 ZNF157P51786 506 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 CSE1LP55060 971 aaKnown RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 AP2B1P63010 937 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 PDE1CQ14123 709 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-206ENST00000530277 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 ACAD11Q709F0 780 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 UNC5BQ8IZJ1 945 aa12.76□□□□□ -0.37
SCN3B-206ENST00000530277 PDZD8Q8NEN9 1154 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms