RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 DNMT3LQ9UJW3 386 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 SLC27A6Q9Y2P4 619 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 ANK1P16157 1881 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 ENC1O14682 589 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 GREM1O60565 184 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 CTSKP43235 329 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 SRSF1Q07955 248 aaKnown RBP eCLIP12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 ILKQ13418 452 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 HS2ST1Q7LGA3 356 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 SPACA3Q8IXA5 215 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 KRI1Q8N9T8 703 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 ERLEC1Q96DZ1 483 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 TM9SF3Q9HD45 589 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 EXOC7Q9UPT5 735 aa12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-207ENST00000529553 FAM92AA1XBS5 289 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 H0Y8X5 98 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 TACC1O75410 805 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 LDOC1O95751 146 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 NTRK1P04629 796 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 KRT18P05783 430 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 GARTP22102 1010 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 CSRP3P50461 194 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 WNT7BP56706 349 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 TBC1D25Q3MII6 688 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 MDH1BQ5I0G3 518 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 ARL6IP4Q66PJ3 421 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 FBXL19Q6PCT2 694 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 UCMAQ8WVF2 138 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 AK8Q96MA6 479 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 HNRNPABQ99729 332 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 STRA6Q9BX79 667 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 KLF16Q9BXK1 252 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 SNX25Q9H3E2 840 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 ZHX3Q9H4I2 956 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 CCSER2Q9H7U1 834 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 IGSF5Q9NSI5 407 aa12.31□□□□□ -0.44
AMBRA1-207ENST00000529553 A0A1B0GTQ1 180 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 KCNK3O14649 394 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 BRINP1O60477 761 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 TSPAN3O60637 253 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 CD27P26842 260 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 COPAP53621 1224 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 CACNA2D1P54289 1103 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 CDH8P55286 799 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 TMPRSS3P57727 454 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 CCDC173Q0VFZ6 552 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 BROXQ5VW32 411 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 TPGS1Q6ZTW0 290 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 SNRNP27Q8WVK2 155 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 RFFLQ8WZ73 363 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 TSC1Q92574 1164 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 WBP2Q969T9 261 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 CNDP2Q96KP4 475 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 ACCSQ96QU6 501 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 NACA2Q9H009 215 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 LSM7Q9UK45 103 aaKnown RBP12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 MYOFQ9NZM1 2061 aa12.3□□□□□ -0.44
AMBRA1-207ENST00000529553 ATMQ13315 3056 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 TCHHQ07283 1943 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 CABIN1Q9Y6J0 2220 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 COL6A6A6NMZ7 2263 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 VWA3AA6NCI4 1184 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 VILLO15195 856 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 YKT6O15498 198 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 TIMM44O43615 452 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 PPP1R37O75864 691 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 TNNC2P02585 160 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 IRF1P10914 325 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 ZBTB16Q05516 673 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 ST3GAL1Q11201 340 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 DHX8Q14562 1220 aaKnown RBP12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 SURF1Q15526 300 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 HES3Q5TGS1 186 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 SNX19Q92543 992 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 SKA1Q96BD8 255 aa12.29□□□□□ -0.44
AMBRA1-207ENST00000529553 MED8Q96G25 268 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms