RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
COPB1-206ENST00000529210 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
COPB1-206ENST00000529210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.66□□□□□ -0.38
COPB1-206ENST00000529210 MYO18AQ92614 2054 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 PLXND1Q9Y4D7 1925 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 GTPBP10A4D1E9 387 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 PRR5-ARHGAP8B1AHC4 643 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 RNF225M0QZC1 329 aaPredicted RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 TULP2O00295 520 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 SCAMP3O14828 347 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 AXIN1O15169 862 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 FOXD2O60548 495 aaPredicted RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 TULP3O75386 442 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 RPP40O75818 363 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 HOXC13P31276 330 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 ID4P47928 161 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 DGKEP52429 567 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.38
COPB1-206ENST00000529210 ARHGAP8P85298 464 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 FOXK2Q01167 660 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 LRMPQ12912 555 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 CRY1Q16526 586 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 C10orf120Q5SQS8 335 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 ENOSF1Q7L5Y1 443 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 ERMP1Q7Z2K6 904 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 FAM217AQ8IXS0 508 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 PPM1KQ8N3J5 372 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 TFAP2BQ92481 460 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 KAT5Q92993 513 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 FAM81BQ96LP2 452 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 ZSWIM1Q9BR11 485 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 ULBP1Q9BZM6 244 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 PARD6AQ9NPB6 346 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 OLA1Q9NTK5 396 aaKnown RBP12.65□□□□□ -0.38
COPB1-206ENST00000529210 DEC1Q9P2X7 70 aa12.65□□□□□ -0.38
COPB1-206ENST00000529210 MDM4O15151 490 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 PENKP01210 267 aaPredicted RBP12.64□□□□□ -0.39
COPB1-206ENST00000529210 KLKB1P03952 638 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 IRF1P10914 325 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 CD19P15391 556 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 SDHBP21912 280 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 CHKAP35790 457 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 DAOAP59103 153 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 LMNB2Q03252 620 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
COPB1-206ENST00000529210 TRIP4Q15650 581 aaPredicted RBP12.64□□□□□ -0.39
COPB1-206ENST00000529210 CAMK4Q16566 473 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
COPB1-206ENST00000529210 C11orf74Q86VG3 221 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 ARHGEF19Q8IW93 802 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 SFTPA1Q8IWL2 248 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 CPXM2Q8N436 756 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 FAM160A2Q8N612 972 aaPredicted RBP12.64□□□□□ -0.39
COPB1-206ENST00000529210 IRGQQ8WZA9 623 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 PLD4Q96BZ4 506 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 KREMEN1Q96MU8 473 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
COPB1-206ENST00000529210 HHIPQ96QV1 700 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 CLSTN2Q9H4D0 955 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 LRRC4Q9HBW1 653 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 NUDT5Q9UKK9 219 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 STRIP2Q9ULQ0 834 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 PCDHB4Q9Y5E5 795 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 PCDHGA5Q9Y5G8 931 aa12.64□□□□□ -0.39
COPB1-206ENST00000529210 RALGAPA1Q6GYQ0 2036 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 EPN2O95208 641 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 LATS1O95835 1130 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 CISD3P0C7P0 127 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 TYRP14679 529 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 ADIGQ0VDE8 80 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.39
COPB1-206ENST00000529210 CSRP2Q16527 193 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 ANO4Q32M45 955 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
COPB1-206ENST00000529210 EOGTQ5NDL2 527 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 PMF1Q6P1K2 205 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 MSANTD2Q6P1R3 559 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 CEP68Q76N32 757 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.63□□□□□ -0.39
COPB1-206ENST00000529210 RBBP8NLQ8NC74 664 aaPredicted RBP12.63□□□□□ -0.39
COPB1-206ENST00000529210 TSTD1Q8NFU3 115 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 OLIG1Q8TAK6 271 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 RMDN1Q96DB5 314 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 BBS2Q9BXC9 721 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
COPB1-206ENST00000529210 INTS2Q9H0H0 1204 aaKnown RBP12.63□□□□□ -0.39
COPB1-206ENST00000529210 ABCC13Q9NSE7 274 aa12.63□□□□□ -0.39
COPB1-206ENST00000529210 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
COPB1-206ENST00000529210 MARCH2Q9P0N8 246 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms