RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 HTR7P34969 479 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 CHKAP35790 457 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 NOP2P46087 812 aaKnown RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SLC11A2P49281 568 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF143P52747 638 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 GALCP54803 685 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SLC7A9P82251 487 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 NR1H3Q13133 447 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 MAMLD1Q13495 774 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SMAD2Q15796 467 aaKnown RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 CCDC85BQ15834 202 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 CLUL1Q15846 466 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 PRSS36Q5K4E3 855 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 GPR158Q5T848 1215 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 E4F1Q66K89 784 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 FAM183BPQ6ZVS7 135 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 TMC8Q8IU68 726 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 YAF2Q8IY57 180 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 CMTM8Q8IZV2 173 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 ATP6V0D2Q8N8Y2 350 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 ZNF564Q8TBZ8 553 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SUSD6Q92537 303 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SMARCD2Q92925 531 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 RNF34Q969K3 372 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 AZIN2Q96A70 460 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SLC2A13Q96QE2 648 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 PCDHB18PQ96TA0 734 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 TBCBQ99426 244 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 NUP85Q9BW27 656 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 S1PR5Q9H228 398 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 PRDM16Q9HAZ2 1276 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 TRPV4Q9HBA0 871 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 MARCH2Q9P0N8 246 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 GMIPQ9P107 970 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 EPS15L1Q9UBC2 864 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 MYO1AQ9UBC5 1043 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 ARHGAP26Q9UNA1 814 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 USP15Q9Y4E8 981 aaPredicted RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 HELZP42694 1942 aaKnown RBP8.28□□□□□ -1.08
SSBP3-211ENST00000528787 DENND4AQ7Z401 1863 aa8.28□□□□□ -1.08
SSBP3-211ENST00000528787 A0A1W2PQH9 124 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 E2F8A0AVK6 867 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 YJEFN3A6XGL0 299 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 E7ENQ6 273 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GOLGA8SH3BPF8 625 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 LINC01565O15544 149 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 PJA2O43164 708 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 IRAK2O43187 625 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 MBTPS2O43462 519 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 ECI2O75521 394 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 ZNF189O75820 626 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 OLFM2O95897 454 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 CYBBP04839 570 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 KRT7P08729 469 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 RRM1P23921 792 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 PSMA2P25787 234 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 RDXP35241 583 aaKnown RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.091e-6■□□□□ 8.9
SSBP3-211ENST00000528787 PCK1P35558 622 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GPR15P49685 360 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 CACNA2D1P54289 1103 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 OXCT1P55809 520 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 RNASE9P60153 205 aaKnown RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 DEUP1Q05D60 604 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 PPP2R5DQ14738 602 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 TRIP4Q15650 581 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 BOLA3Q53S33 107 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 TTC39BQ5VTQ0 682 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 SDHAF4Q5VUM1 108 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 PTCRAQ6ISU1 281 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GAREM2Q75VX8 874 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GET4Q7L5D6 327 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 MAP7D3Q8IWC1 876 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 ZDHHC14Q8IZN3 488 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 NIPA2Q8N8Q9 360 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 MAB21L3Q8N8X9 362 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 TRIM58Q8NG06 486 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 SHKBP1Q8TBC3 707 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 GPR152Q8TDT2 470 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 PPM1EQ8WY54 764 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 FGF13Q92913 245 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 MSANTD3Q96H12 275 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 BTN2A3PQ96KV6 586 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 MCEEQ96PE7 176 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 DDX23Q9BUQ8 820 aaKnown RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 LRRC3Q9BY71 257 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 THAP2Q9H0W7 228 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 WDCPQ9H6R7 721 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 IL21Q9HBE4 155 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 TRPC7Q9HCX4 862 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 METTL5Q9NRN9 209 aaKnown RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 SPTLC3Q9NUV7 552 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 CHORDC1Q9UHD1 332 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-211ENST00000528787 CYTH4Q9UIA0 394 aa8.27□□□□□ -1.09
SSBP3-211ENST00000528787 ANAPC7Q9UJX3 599 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms