RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 TYRP14679 529 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 GABRG2P18507 467 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 ZCWPW2Q504Y3 356 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 C10orf120Q5SQS8 335 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 LPCAT2Q7L5N7 544 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 DUSP16Q9BY84 665 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 IMPG2Q9BZV3 1241 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 NAGPAQ9UK23 515 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 KMT2BQ9UMN6 2715 aaPredicted RBP16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 A0A1W2PQ27 194 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 A0A1W2PQ64 194 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 A0A1W2PQD8 194 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 A0A1W2PQF6 199 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 KLKB1P03952 638 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 NTSR1P30989 418 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 PLA2G4AP47712 749 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 UAP1L1Q3KQV9 507 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 KRT39Q6A163 491 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 KIAA1211LQ6NV74 962 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 ARID3AQ99856 593 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 WDR35Q9P2L0 1181 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 DNMT3LQ9UJW3 386 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 ANGPTL2Q9UKU9 493 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
CLNS1A-210ENST00000528364 CACNA1EQ15878 2313 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 WASH3PC4AMC7 463 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 CACNG3O60359 315 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 STC2O76061 302 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 HMBSP08397 361 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 HOXB2P14652 356 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 ITPKAP23677 461 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 NOVA1P51513 510 aaKnown RBP16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 RAD23BP54727 409 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 MCCD1P59942 119 aaPredicted RBP16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 PNOCQ13519 176 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 ST3GAL2Q16842 350 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 TRIM61Q5EBN2 209 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 Q6ZNB5 142 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 SLC4A11Q8NBS3 891 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 KCNV2Q8TDN2 545 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 NDRG1Q92597 394 aaKnown RBP16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 SPACA7Q96KW9 195 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 XPO6Q96QU8 1125 aaKnown RBP16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 SLC6A17Q9H1V8 727 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 CD248Q9HCU0 757 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 TMEM9BQ9NQ34 198 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 FSCN3Q9NQT6 498 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 MARK1Q9P0L2 795 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 LSM7Q9UK45 103 aaKnown RBP16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 RAD54BQ9Y620 910 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 USP3Q9Y6I4 520 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 PCNX2A6NKB5 2137 aa16.34■□□□□ 0.21
CLNS1A-210ENST00000528364 EFEMP1Q12805 493 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 SH3PXD2AQ5TCZ1 1133 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 DAB2IPQ5VWQ8 1189 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 NUDT18Q6ZVK8 323 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 SYT12Q8IV01 421 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 CHPFQ8IZ52 775 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 CCDC150Q8NCX0 1101 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 IPO4Q8TEX9 1081 aaKnown RBP16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 SCAND2PQ9GZW5 306 aaPredicted RBP16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 PNPLA8Q9NP80 782 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 CD93Q9NPY3 652 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 CISHQ9NSE2 258 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 RASAL2Q9UJF2 1139 aa16.33■□□□□ 0.2
CLNS1A-210ENST00000528364 LAMA1P25391 3075 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 TULP2O00295 520 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 TOP3BO95985 862 aaKnown RBP16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 RALAP11233 206 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 NDUFV2P19404 249 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 GTF2H1P32780 548 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 PRCPP42785 496 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 MAPK8P45983 427 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 DGKGP49619 791 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 MXI1P50539 228 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 ENPEPQ07075 957 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 GOLGA8FQ08AF8 430 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 GOLGA8DPQ0D2H9 430 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 BYSLQ13895 437 aaKnown RBP16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 PREPLQ4J6C6 727 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 LYSMD4Q5XG99 296 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 TRMT11Q7Z4G4 463 aaKnown RBP16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 PIGZQ86VD9 579 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 FBXL13Q8NEE6 735 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 CEP192Q8TEP8 1941 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 TMEM176AQ96HP8 235 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 RAB20Q9NX57 234 aa16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 EVLQ9UI08 416 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-210ENST00000528364 FBXO10Q9UK96 956 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms