RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 FUT11Q495W5 492 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 TPGS1Q6ZTW0 290 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 ZCCHC9Q8N567 271 aaKnown RBP13.01□□□□□ -0.33
SRPRA-202ENST00000527817 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
SRPRA-202ENST00000527817 ADAM32Q8TC27 787 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 NACA2Q9H009 215 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 HSPBP1Q9NZL4 362 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 GMIPQ9P107 970 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 SRPRBQ9Y5M8 271 aaKnown RBP13.01□□□□□ -0.33
SRPRA-202ENST00000527817 ATP8B3O60423 1300 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 KCNJ18B7U540 433 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 TLR5O60602 858 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 IGLV3-19P01714 112 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 TNNI1P19237 187 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 ACO1P21399 889 aaKnown RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 ATICP31939 592 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 ATP5C1P36542 298 aaKnown RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 PGFP49763 221 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 TPMTP51580 245 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 ENPP2Q13822 863 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 STARD3Q14849 445 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 STXBP4Q6ZWJ1 553 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 FAM35AQ86V20 835 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 TNIP3Q96KP6 325 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 UBL7Q96S82 380 aaPredicted RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 NUP58Q9BVL2 599 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 MKRN2Q9H000 416 aaKnown RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 MIR1-1HGQ9H1L0 117 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 FBXO44Q9H4M3 255 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 THAP10Q9P2Z0 257 aaPredicted RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 LSM7Q9UK45 103 aaKnown RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 FNDC3AQ9Y2H6 1198 aaKnown RBP13□□□□□ -0.33
SRPRA-202ENST00000527817 SLC27A6Q9Y2P4 619 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 STON1Q9Y6Q2 735 aa13□□□□□ -0.33
SRPRA-202ENST00000527817 TNFSF14O43557 240 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 TBX18O95935 607 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 DLATP10515 647 aaKnown RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 HOXD13P35453 343 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 TRPC3Q13507 836 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 PSMD6Q15008 389 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 E2F5Q15329 346 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 SMAD1Q15797 465 aaKnown RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 CCDC73Q6ZRK6 1079 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 TMPRSS6Q8IU80 811 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 CCDC65Q8IXS2 484 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 ZNF516Q92618 1163 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 SIPA1Q96FS4 1042 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 SMARCD1Q96GM5 515 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 TMX3Q96JJ7 454 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 MED10Q9BTT4 135 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 XYLT2Q9H1B5 865 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 PCED1AQ9H1Q7 454 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 CYLDQ9NQC7 956 aa12.99□□□□□ -0.33
SRPRA-202ENST00000527817 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 NXF1Q9UBU9 619 aaKnown RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 FBXO2Q9UK22 296 aaPredicted RBP12.99□□□□□ -0.33
SRPRA-202ENST00000527817 AP1G2O75843 785 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 TXLNAP40222 546 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 CDH8P55286 799 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 MYL6P60660 151 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 SNRNP35Q16560 246 aaKnown RBP12.98□□□□□ -0.33
SRPRA-202ENST00000527817 PTPRNQ16849 979 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 KLHDC10Q6PID8 442 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 Q6ZNB5 142 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 MARCH9Q86YJ5 346 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 LSM14AQ8ND56 463 aaKnown RBP12.98□□□□□ -0.33
SRPRA-202ENST00000527817 ZMIZ2Q8NF64 920 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 ZNF507Q8TCN5 953 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 SMOQ99835 787 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 TRIM9Q9C026 710 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 CSNK1G1Q9HCP0 422 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
SRPRA-202ENST00000527817 A0A1B0GVT2 93 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
SRPRA-202ENST00000527817 BEST1O76090 585 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 ACADMP11310 421 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 IL12RB1P42701 662 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
SRPRA-202ENST00000527817 AFF3P51826 1226 aaKnown RBP12.97□□□□□ -0.33
SRPRA-202ENST00000527817 SNRPFP62306 86 aaKnown RBP12.97□□□□□ -0.33
SRPRA-202ENST00000527817 CYP24A1Q07973 514 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 FUKQ8N0W3 1084 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 ZNF276Q8N554 614 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
SRPRA-202ENST00000527817 CRELD1Q96HD1 420 aa12.97□□□□□ -0.33
SRPRA-202ENST00000527817 CLIC6Q96NY7 704 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms