RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 TTC17Q96AE7 1141 aa8.65□□□□□ -1.02
CTNND1-217ENST00000527599 SLC25A32Q9H2D1 315 aa8.65□□□□□ -1.02
CTNND1-217ENST00000527599 USP29Q9HBJ7 922 aa8.65□□□□□ -1.02
CTNND1-217ENST00000527599 METTL14Q9HCE5 456 aaKnown RBP8.65□□□□□ -1.02
CTNND1-217ENST00000527599 PNPLA8Q9NP80 782 aa8.65□□□□□ -1.02
CTNND1-217ENST00000527599 GJB4Q9NTQ9 266 aa8.65□□□□□ -1.02
CTNND1-217ENST00000527599 KPNA5O15131 536 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 ATICP31939 592 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 ATP11CQ8NB49 1132 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 ZBTB9Q96C00 473 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 IQCDQ96DY2 449 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 NAF1Q96HR8 494 aaKnown RBP8.64□□□□□ -1.03
CTNND1-217ENST00000527599 SAP30LQ9HAJ7 183 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 TRNAU1APQ9NX07 287 aaKnown RBP8.64□□□□□ -1.03
CTNND1-217ENST00000527599 SEMA5BQ9P283 1151 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 CACNA1IQ9P0X4 2223 aa8.64□□□□□ -1.03
CTNND1-217ENST00000527599 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 CBFA2T3O75081 653 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 TMEM225BP0DP42 221 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 ARP10275 920 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 TSHRP16473 764 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 THBS4P35443 961 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 NR4A2P43354 598 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 ACOX1Q15067 660 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 TMEM63BQ5T3F8 832 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 FSTL5Q8N475 847 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-217ENST00000527599 C9orf106Q8NAJ2 232 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 VPS50Q96JG6 964 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 TMEM79Q9BSE2 394 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 HEYLQ9NQ87 328 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-217ENST00000527599 AFG3L2Q9Y4W6 797 aa8.63□□□□□ -1.03
CTNND1-217ENST00000527599 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-217ENST00000527599 POM121BA6NF01 834 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 FOXN3O00409 490 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-217ENST00000527599 THAP12O43422 761 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 WDR47O94967 919 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 CASP5P51878 434 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 YPEL5P62699 121 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 GHRHRQ02643 423 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 DNASE1L3Q13609 305 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 AASDHQ4L235 1098 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-217ENST00000527599 CRTC1Q6UUV9 634 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 VSTM1Q6UX27 236 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 NGDNQ8NEJ9 315 aaKnown RBP8.62□□□□□ -1.03
CTNND1-217ENST00000527599 SIGLEC11Q96RL6 698 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 MTMR4Q9NYA4 1195 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 FAM50BQ9Y247 325 aa8.62□□□□□ -1.03
CTNND1-217ENST00000527599 PPM1GO15355 546 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-217ENST00000527599 GALNSP34059 522 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 PBX1P40424 430 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 CFHR1Q03591 330 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 ABLIM2Q6H8Q1 611 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 NANOGP1Q8N7R0 232 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTNND1-217ENST00000527599 NRACQ8N912 160 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 C16orf52Q8NHV5 167 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 LRRC46Q96FV0 321 aa8.61□□□□□ -1.03
CTNND1-217ENST00000527599 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 CLCA1A8K7I4 914 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 AREL1O15033 823 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 RNF8O76064 485 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 FGFR2P21802 821 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 PRIM2P49643 509 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 TXNL4AP83876 142 aaKnown RBP8.6□□□□□ -1.03
CTNND1-217ENST00000527599 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 SHC4Q6S5L8 630 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 KRT73Q86Y46 540 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 FAM71DQ8N9W8 422 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 PIGOQ8TEQ8 1089 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 HIC2Q96JB3 615 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 WDR24Q96S15 920 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 TMEM184CQ9NVA4 438 aa8.6□□□□□ -1.03
CTNND1-217ENST00000527599 KCNQ3O43525 872 aa8.59□□□□□ -1.03
CTNND1-217ENST00000527599 TMIGD3P0DMS9 266 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-217ENST00000527599 CCDC15Q0P6D6 951 aa8.59□□□□□ -1.03
CTNND1-217ENST00000527599 CC2D1BQ5T0F9 858 aaKnown RBP8.59□□□□□ -1.03
CTNND1-217ENST00000527599 ZCWPW1Q9H0M4 648 aa8.59□□□□□ -1.03
CTNND1-217ENST00000527599 MLXIPLQ9NP71 852 aa8.59□□□□□ -1.03
CTNND1-217ENST00000527599 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.03
CTNND1-217ENST00000527599 RRHO14718 337 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 RAE1P78406 368 aaKnown RBP8.58□□□□□ -1.04
CTNND1-217ENST00000527599 COBLL1Q53SF7 1204 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 KIAA0408Q6ZU52 694 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 PIP4P1Q86T03 277 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 P3H2Q8IVL5 708 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 SARGQ9BW04 601 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 ZBTB26Q9HCK0 441 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 MYO1AQ9UBC5 1043 aa8.58□□□□□ -1.04
CTNND1-217ENST00000527599 A0A1W2PPC4 97 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 APAF1O14727 1248 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 BMP15O95972 392 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 FGBP02675 491 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 PRF1P14222 555 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 ZNF91Q05481 1191 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 KCNJ12Q14500 433 aa8.57□□□□□ -1.04
CTNND1-217ENST00000527599 KPNB1Q14974 876 aaKnown RBP8.57□□□□□ -1.04
CTNND1-217ENST00000527599 TRIM71Q2Q1W2 868 aaKnown RBP8.57□□□□□ -1.04
CTNND1-217ENST00000527599 AWAT2Q6E213 333 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms